AMCG00005064


Basic Information

Item Value
gene id AMCG00005064
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 14391236 ~ 14395883 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005064
GCGACAGTATCCGAGAAACAACACCCCCGCTGCAGCAAGTGGAGTAGTCCATCTTTCCTGACAGGCGGCCAGTGCATAAGTGGCGGTTACGACACGAAGGACAGTACCCGTCAAAGCGGCGCATTCAAATTgtctttaacaaacaaaaaaatatcaaataaaatggcGTCGGACCCACTTTCTGCACTACCACCGACGGGGGACGCCTTGAAGCAACGACGTTCAGCGGGAGTCGAAGACAAATCCCCTAACATGCCCGACAGGCCCCGGTTAACGCCTCGGTCCGACGCCTCGTCGAGGACACCGACCCCAGTCCGCCCGAAGATCGTGCCGGCGAGAAGGAAGCTCCTGACGCCCAACCCCGACGGGGAGGAATACGACGAAGCCACCGAGGAGGCGATGGTTTTGCCGCCGATTTACACCTCTGGTCGGCGGTATAGCCAGGCTGAGAGGGTCGCCCTGTACTGCGATCAAATTCTAGGCCAGTGCAAGGCTGAAGATGCCGAGGAAATTTTAAGCAAATATCTGATGGGAAAACTAGCAGCCAAAAGGTCTTGGGTGGGAGTTTGGACCGCAAACCCGGGGCTCTTCCTTGTAAACCAGTATGAGGATATATCTGATGTTGGTGTTCTGGTTGAAGTTCATGGCAAACCATGTCAAAGCAAGAGTCTCCCTCTTCAAGTCATGGTCTCCATAGCCGAGCCCTTCTCCTCCAGCGTGGCCAACCTGCCCCGGGATCTGGCTGAAGACGTCTTGACCCTACAGGACCACTGTGTTTCCCTGCTGGATGTGTATCCCATAGAGGCATCGGACCCTGCAGTGAAGGACATCGCCCAAGCCCTGGAGAACGCCAGGTTTTTCTACGATTTCCTCTGGAGAGACTGGGATGAAGAAGAGGATTGTGACGACTACACTGGACTTATTGAGAAGCGCGTACAGCTGCACTATGACATTGAGCAGGGGGCTGTTCCAGGATCCATCGGCGACCGCTTCAGAAGGACGCTGAGAAAGTACAAGAATAAAAGACTGGACCTCCAAGAGTATCAGAGCAGCATTAAAGGGAATCCCTCGGCAGGGGAGGCCGTTGAATGCTGGAAGAAGCACTTTGAGATCTTAATGCTCAGGGGCTTGCTGAAATTTTGGGAAGACCTCAACCTcagatCATATGGACCCTGCCTTACAAGAATATCTAAACACAGACGACAGAGAGATTCAGGACAAGTTGTCACTCACATTGTTGCCCAGATGATGACAGCAGACATGGTACAGAGCTTCTGTGCCGACACCCTAATTCAGCAGCACGCCAGTCTGTCCGCAGCGCTTAGCGCCTGCTTCTCTGGGGACACCGTGCTGCTCTTCCCAGGGCAATATCAGGCCCCTGCACTTGACTGTCTGGCAGATGACATCATTATTAAGGGAGCTGGAAACAGAAAAGATGTAGTTATTGTGTCAGATCCATCACAGTATAGCTTTGTGGCGTCTAAAGCTGCAGATGTCACACTGAAGAGCCTCACTTTGGTGCAGTGTGGCACCTGTGACGGCGCTGTGGTGGTGGAGTGTGGCCACATGACCCTGGAGGACTGTGTCCTGAATTGTGAAGGCACTGGGGTGTGTGTTCTGGCAGGGGCGACTCTGGTCCTGAAGAACTGTGAGATTTCTAGTGCTCAGGGAGCAGGAGTTGAACTGTATCCTGGAAGCGTTGCCGAATTGGAGGGGAACAATATTCATCACTGCTGCAACCTGAGCAAGAAAGACATCCTGGAGCCATCACTGGGAGGCATCAATATAAAGGTTCTCCCGGAGCCagaagtgaaaatgttcaacaaCCATATTCACAACAATCGGGGTTACGGAGTGGCCATTCTTATGCCAGAGAATCCCCATAAAGCACAGAAGGACGGGCCAGAGCATCTCGCAAGTggggagaagagagaaactGATCCTCTCTCAAAGGCCCTGGAGAAACTCAATCTCGAAATGATTACtaataaaatggaaagcaaTACCATGGGAAGTTTTGGGGTTCTTCACAAAGATTACGTATGATTTCACAACGAGAGATTCTATCTatgtaaatgttcattttaattcgGTTAATGATAGTAATTGTGTTCTTTTAAGATTTGCGTTAGTTAGTCGTGGAGAACAATACCAGTTGGTCTACATACATATGAATGGAacttatttgatattttaatgacaatttAATCTAGATGTTTGTGTTCAATTGCTGTTCAACTGAATGACAAAAGTGTTCATAgaaattgaaacaaattaatttaattttaagaacGTTCTAAACTCCAAATGCAGTTCTGATGTTATTGAAAACATGTATGTTCTGTGTTCCTTTCTGAAATACTACATGCTACACGCTCATGTATTAGTCATGTGTATAGCTGGAAGAGGCAATAATACCattccagaaaaataaatcttagatatttattttaaataaagtttggtCAAAGTTAACTTATTGATCTACTGTATCATATCATTTATTGCATTCATATATAATCCTGGTACATCCCACAGCCTGGTCTTTGTTTCAGCTGAACAGAACAGAATGTCATATACAAGGAGGTGGAAATCTGGTATTTTACATGAATTGCAATGGAAAAGTCCTACAGCACTAACTTCATACGGAgtcaatcattaacaaaaaacatgttctgaGGGAAAGTCTGACAGGAAGTAAACATAACCACTTCAACAGAGTATAACATGCTCTAGAGCAgaatttatgaaaaacaaacaaaagctgcGTATCTTTTGTACACGGTTGCTTTCTaaaacccccctccccctctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005064 True 2814 mRNA 0.47 10 14391236 14395883

Neighbor

gene id symbol gene type direction distance location
AMCG00005054 NA coding downstream 301896 14082458 ~ 14089340 (-)
AMCG00005056 klhl20 coding downstream 315603 14066698 ~ 14075633 (-)
AMCG00005055 LOC104960769 coding downstream 329574 14050704 ~ 14061662 (-)
AMCG00005046 astn1 coding downstream 560890 13804007 ~ 13830346 (-)
AMCG00005047 astn1 coding downstream 646607 13739454 ~ 13744629 (-)
AMCG00005070 nmnat2,LOC106569066,LOC107563562,LOC107678925,LOC107658365 coding upstream 84524 14480407 ~ 14483193 (-)
AMCG00005069 NA coding upstream 148939 14544822 ~ 14552948 (-)
AMCG00005071 NA coding upstream 187260 14583143 ~ 14618511 (-)
AMCG00005073 NA coding upstream 225297 14621180 ~ 14625015 (-)
AMCG00005072 pde4dip,LOC106569692 coding upstream 229361 14625244 ~ 14633980 (-)
G145148 NA non-coding downstream 186747 14204259 ~ 14204489 (-)
G145146 NA non-coding downstream 207723 14180104 ~ 14183513 (-)
G145138 NA non-coding downstream 229260 14157580 ~ 14161976 (-)
G145131 NA non-coding downstream 328113 14062865 ~ 14063123 (-)
G145130 NA non-coding downstream 328612 14062344 ~ 14062624 (-)
G145173 NA non-coding upstream 31083 14426966 ~ 14455083 (-)
G145358 NA non-coding upstream 672530 15068413 ~ 15069113 (-)
G145387 NA non-coding upstream 709335 15105218 ~ 15105450 (-)
G145401 NA non-coding upstream 749915 15145798 ~ 15149592 (-)
G145434 NA non-coding upstream 857630 15253513 ~ 15254888 (-)
G145046 NA other downstream 1054490 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 2042908 12344671 ~ 12348328 (-)
AMCG00005011 best4,LOC103396708 other downstream 2234858 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 5484642 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 5543461 8836360 ~ 8847775 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 568531 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 1107199 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 1562821 15958704 ~ 15978855 (-)
AMCG00005158 NA other upstream 3147263 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 4346001 18741884 ~ 18764298 (-)

Expression


Co-expression Network