AMCG00005073


Basic Information

Item Value
gene id AMCG00005073
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 14621180 ~ 14625015 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005073
ATGTGGGTCGAGCAGAAGTCAGCCCCACCGATGTGCCGTTATTATGTCTTTTCACACAGCCGCTTGGACAAAGGTATTTTTTCTCATGTTCACGTTTTCCTGCAtgtctcttccccctctctcctcggCAGAATAATCAACGAACTTACTCAGGAGTTGCGCGCCAAAGACGCTCTAATCACCGAGCTCTCGGACGAGAAGACGTTCCTGAATGAGAGAGTGGGGGAGCTGGAGGATCAAGTCCATGACCTCACTTCCTCTGTGCAGCAGAAGGAGAGGGATGCTGAGGTAGGCTTGGCTCGCTGGACTACTATGAAGTTTCAAGTCTCAGTTCACTTTTTCCAGGACGAGCTGGGCCGGGAGAAGCTGCGTATTCAGCAGGAGATGCAGCTGGGCTTCAGCCTTGCCTCCTGTGGCTGGTTCAGACGGGCTAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005073 True 438 mRNA 0.53 3 14621180 14625015

Neighbor

gene id symbol gene type direction distance location
AMCG00005071 NA coding downstream 2669 14583143 ~ 14618511 (-)
AMCG00005069 NA coding downstream 68232 14544822 ~ 14552948 (-)
AMCG00005070 nmnat2,LOC106569066,LOC107563562,LOC107678925,LOC107658365 coding downstream 137987 14480407 ~ 14483193 (-)
AMCG00005064 NA coding downstream 225297 14391236 ~ 14395883 (-)
AMCG00005054 NA coding downstream 531840 14082458 ~ 14089340 (-)
AMCG00005072 pde4dip,LOC106569692 coding upstream 229 14625244 ~ 14633980 (-)
AMCG00005075 prrx1,LOC107726494 coding upstream 52645 14677660 ~ 14690953 (-)
AMCG00005074 gorab coding upstream 76333 14701348 ~ 14705852 (-)
AMCG00005076 NA coding upstream 110824 14735839 ~ 14741930 (-)
AMCG00005081 NA coding upstream 146547 14771562 ~ 14784842 (-)
G145173 NA non-coding downstream 166097 14426966 ~ 14455083 (-)
G145148 NA non-coding downstream 416691 14204259 ~ 14204489 (-)
G145146 NA non-coding downstream 437667 14180104 ~ 14183513 (-)
G145138 NA non-coding downstream 459204 14157580 ~ 14161976 (-)
G145131 NA non-coding downstream 558057 14062865 ~ 14063123 (-)
G145358 NA non-coding upstream 443398 15068413 ~ 15069113 (-)
G145387 NA non-coding upstream 480203 15105218 ~ 15105450 (-)
G145401 NA non-coding upstream 520783 15145798 ~ 15149592 (-)
G145434 NA non-coding upstream 628498 15253513 ~ 15254888 (-)
G145436 NA non-coding upstream 630874 15255889 ~ 15257664 (-)
G145046 NA other downstream 1284434 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 2272852 12344671 ~ 12348328 (-)
AMCG00005011 best4,LOC103396708 other downstream 2464802 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 5714586 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 5773405 8836360 ~ 8847775 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 339399 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 878067 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 1333689 15958704 ~ 15978855 (-)
AMCG00005158 NA other upstream 2918131 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 4116869 18741884 ~ 18764298 (-)

Expression


Co-expression Network