AMCG00005136


Basic Information

Item Value
gene id AMCG00005136
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 16773667 ~ 16775958 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005136
GCCGAACATTACACTACAAGCCTAACTCCTACAATTCTTAACCTGCATATACCAAACTTCATACCGTGATTCATTATGATACCGTGATTCAAGATTGCGATTTGTGCACGGCTTAGGATTGACACTTATTGATTTATGATCGATTTAATCGCCAACACTTCCCACTGACTTCAGTTGTGGAAAACTCGCTGTCCCCCGTCATTGCAATTGAGATTTAATTTGCATAACTAATCAGCGGTCACGGTTGCGACCTGTATATCCGTGTTATAGTGGGATTTCCCATTGCGGTCCTGATGTgACTGCCTAAACCTGGAATAAAGAATGTAACCAATGCCAAAGGGAGGGTGAAGGAGCCTGTGAACGTGGTGCAACAGGATGCCATCATGCGCGAGAACGTCTGGAAGGAGCAACAGTACCAGTTAATGTACAGAACCTTCAAAATCAACCCCTTCAAGAAACAGCACCTGTTGACTGAGAAGGCAATGCCCCAGAAAGCGCTCGAGGATGATGAAGAGAAAGAACGTGTTGTAGTGACCTTTTTAGAAGAGATCCGCAGAGCCAGACTCGAACCCAGAAAGAAGTACACCCATCCCCAGACATCGAGCCAAGAGATCGGCTGGTACACCTCCCCTCTGGTAAGAGAGCAGCAGCACATGTGTACTTCAGTCACCTCTCACCCATGGTGGACAGATTGATCAAGACCAAAGACAAGACTTCCATCGCAAGAGTACGGAAATCACAAATTACATGGATGCAGCGTGGCGCCTGAAGGAGCAGATCAAGTACAGCAAGTAAAGTGTCCTGCAACATAAAACGCAAGAGATGCTGTTGTAAGATATGGCACAGTGTAATTGAGCCTTTGGCTTTGACTTTTCTGCGATCAGGTTAGCATTCCTGATATTCTAAGCACTTAGTTTGCATTCAGCCAATCGCTGTACTAGGGAGGGACTTGTGCACTCGCACCAAggcaatgtgtttatttacagttaGGCACTTCCTTATGCTACCAATACAATATGACTTTTTACTAATATTAGCAATATAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005136 True 1047 mRNA 0.45 5 16773667 16775958

Neighbor

gene id symbol gene type direction distance location
AMCG00005129 LOC107757695,LOC106590636 coding downstream 456366 16312761 ~ 16317301 (-)
AMCG00005128 col11a1 coding downstream 471214 16229357 ~ 16302453 (-)
AMCG00005125 olfm3 coding downstream 568466 16191169 ~ 16205201 (-)
AMCG00005133 LOC103369878 coding downstream 606867 16138468 ~ 16166800 (-)
AMCG00005124 abcd3,LOC107739019,LOC107560648,LOC107657768 coding downstream 716192 16046479 ~ 16057475 (-)
AMCG00005140 NA coding upstream 6298 16782256 ~ 16799686 (-)
AMCG00005141 vav3 coding upstream 30285 16806243 ~ 16809658 (-)
AMCG00005142 NA coding upstream 37187 16813145 ~ 16814654 (-)
AMCG00005143 NA coding upstream 73844 16849802 ~ 16850062 (-)
AMCG00005139 slc25a24,LOC108439838 coding upstream 87020 16862978 ~ 16875255 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 398250 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 1506719 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 1516003 15255889 ~ 15257664 (-)
G145434 NA non-coding downstream 1518779 15253513 ~ 15254888 (-)
G145401 NA non-coding downstream 1624075 15145798 ~ 15149592 (-)
G145760 NA non-coding upstream 188245 16964203 ~ 16965074 (-)
G145995 NA non-coding upstream 1248807 18024765 ~ 18025674 (-)
G146022 NA non-coding upstream 1521889 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 1575909 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 2308037 19083995 ~ 19086041 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 794812 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 1238522 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 1804425 14964414 ~ 14969242 (-)
G145046 NA other downstream 3436921 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 4425339 12344671 ~ 12348328 (-)
AMCG00005158 NA other upstream 767188 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 1965926 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 2237119 19013077 ~ 19024461 (-)
G146313 NA other upstream 2794101 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 2982274 19758232 ~ 19761446 (-)

Expression


Co-expression Network