AMCG00005142


Basic Information

Item Value
gene id AMCG00005142
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 16813145 ~ 16814654 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005142
TATTTTATGACACCCCTCAGGAAATTTTTGTCGCCAATGGAAATTGAAAAAGTGTTTGTTAACATTCCAGAGCTTGTGAAGGTCCACAAAAGCCTAATGCTTGAAATACAAGACTCCATCTGCAATAAAAGTGCTCAAAACCTGTACCAGATTTTCATTAACTACAAAGAAAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005142 True 177 mRNA 0.36 2 16813145 16814654

Neighbor

gene id symbol gene type direction distance location
AMCG00005141 vav3 coding downstream 3487 16806243 ~ 16809658 (-)
AMCG00005140 NA coding downstream 13459 16782256 ~ 16799686 (-)
AMCG00005136 NA coding downstream 37187 16773667 ~ 16775958 (-)
AMCG00005129 LOC107757695,LOC106590636 coding downstream 495844 16312761 ~ 16317301 (-)
AMCG00005128 col11a1 coding downstream 510692 16229357 ~ 16302453 (-)
AMCG00005143 NA coding upstream 35148 16849802 ~ 16850062 (-)
AMCG00005139 slc25a24,LOC108439838 coding upstream 48324 16862978 ~ 16875255 (-)
AMCG00005148 NA coding upstream 89246 16903900 ~ 16907830 (-)
AMCG00005152 NA coding upstream 100603 16915257 ~ 16920464 (-)
AMCG00005151 NA coding upstream 105815 16920469 ~ 16944176 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 437728 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 1546197 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 1555481 15255889 ~ 15257664 (-)
G145434 NA non-coding downstream 1558257 15253513 ~ 15254888 (-)
G145401 NA non-coding downstream 1663553 15145798 ~ 15149592 (-)
G145760 NA non-coding upstream 149549 16964203 ~ 16965074 (-)
G145995 NA non-coding upstream 1210111 18024765 ~ 18025674 (-)
G146022 NA non-coding upstream 1483193 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 1537213 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 2269341 19083995 ~ 19086041 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 834290 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 1278000 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 1843903 14964414 ~ 14969242 (-)
G145046 NA other downstream 3476399 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 4464817 12344671 ~ 12348328 (-)
AMCG00005158 NA other upstream 728492 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 1927230 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 2198423 19013077 ~ 19024461 (-)
G146313 NA other upstream 2755405 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 2943578 19758232 ~ 19761446 (-)

Expression


Co-expression Network