AMCG00005143


Basic Information

Item Value
gene id AMCG00005143
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 16849802 ~ 16850062 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005143
ATGATGGAGCCTTGGAGGCAATGCGCGCTGTGGCTGATCAATTGCAAGGTGCTGCCGCCCAACCACCGGGTAACATGGGAGTCTGCCCAGGTGTTTGATTTAGCCCAGACCCTGAGGGACGGGGTCCTTCTGTGCCAGCTTCTCAACAACCTCAGACCTCAGTCCATCAACCTGAAAGAGATCAACCTGAGACCGCAGATGTCACAGGTAAGCAAGGATACTGTTTGTTACTGTGATCATGAGCCAGTAGTTTTTGAGTAG

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005143 True 261 mRNA 0.52 1 16849802 16850062

Neighbor

gene id symbol gene type direction distance location
AMCG00005142 NA coding downstream 35148 16813145 ~ 16814654 (-)
AMCG00005141 vav3 coding downstream 40144 16806243 ~ 16809658 (-)
AMCG00005140 NA coding downstream 50116 16782256 ~ 16799686 (-)
AMCG00005136 NA coding downstream 73844 16773667 ~ 16775958 (-)
AMCG00005129 LOC107757695,LOC106590636 coding downstream 532501 16312761 ~ 16317301 (-)
AMCG00005139 slc25a24,LOC108439838 coding upstream 12916 16862978 ~ 16875255 (-)
AMCG00005148 NA coding upstream 53838 16903900 ~ 16907830 (-)
AMCG00005152 NA coding upstream 65195 16915257 ~ 16920464 (-)
AMCG00005151 NA coding upstream 70407 16920469 ~ 16944176 (-)
AMCG00005150 NA coding upstream 104813 16954875 ~ 16960869 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 474385 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 1582854 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 1592138 15255889 ~ 15257664 (-)
G145434 NA non-coding downstream 1594914 15253513 ~ 15254888 (-)
G145401 NA non-coding downstream 1700210 15145798 ~ 15149592 (-)
G145760 NA non-coding upstream 114141 16964203 ~ 16965074 (-)
G145995 NA non-coding upstream 1174703 18024765 ~ 18025674 (-)
G146022 NA non-coding upstream 1447785 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 1501805 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 2233933 19083995 ~ 19086041 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 870947 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 1314657 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 1880560 14964414 ~ 14969242 (-)
G145046 NA other downstream 3513056 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 4501474 12344671 ~ 12348328 (-)
AMCG00005158 NA other upstream 693084 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 1891822 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 2163015 19013077 ~ 19024461 (-)
G146313 NA other upstream 2719997 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 2908170 19758232 ~ 19761446 (-)

Expression


Co-expression Network