AMCG00005163


Basic Information

Item Value
gene id AMCG00005163
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 17064599 ~ 17087674 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005163
ctttcgcAGAGTGCACACTTGGCCATGATCGACACGCTGATGATGGCTTACACTGTGGAGATGGTGAGCGTGGAGAAGGTTGTGAAGTGCGTACAGAAGTACTCACCTTTTTATCCTGATGTCGATATGCCGTATGATACCGAGGATGCTGTCACCAGCTGGATTAATAAGgtAAATGAACACTTAAAAGACATCATCATCCAAGAGCAGAAGATCCGAGAAGCTCAGTGTTCAGAACCCTCTGGAGGACCAAGGGCTCGCTACAGGAAGGAACAGGCAATGCCAAGACAAATACCATGCATTCCCCCCGTGGACAACTTACTGAAAGACAGCACTGATGGCTGTGCACTGGCTGCTTTGATCCACTTCTACTGCCCAGACATCGTGAAGTTAGAAGATATCTGCTTGAAGGAGACCATGTCGTTGGCAGACAGCTTGTATAATCTACAGCTGATTCAGGAATTCTGTCAGGAGAACTTGAACCGATGTTGTCACTTCACGCTAGAAGACATGCTCTATGCCTCCTCCTCGATAAAGaATAACTACCTTGTGTTCATGGCAGAGCTGTTCTGGTGGTTTGAAGTGGTGAAGCCATCATTTGTACAACCCCGTGTTTTAGACCCTGAAgCTCCGGAGCCAGTCCAGCCACTGCGAAACATGCCTACAGTGCCCATTTCAAATGCCACCAAAAGAAGCTTTATTGAGAACCCTCCCAGTACAGACCAGTCCAGCCTGCCCTTGTCACCAGCAGAGTCTCTTCTGCCCCTCAGGCACACGCAACCACATCCTGAAATGGCCACTTCGGgtgtGATGAAAAGATCAACCTCGATGTCTTACATGGATGGTTGTGTTGGCACGTGGCCGAAGGAGAAACGGTCATCAGCTCATGGAGTATCCTTTGACATCCCATTCGACAAAGAGAACTCTATGCAGATGCCTTCAACCCGTAGTAAAGGGATGACCAGGTCTATCAGCACCGAAGGTCTAGGGTTTAAAGTCAATCACCTGCCCAGAAACATCAAGAGAAACCTCTCCTTCCAGCCTGTGAACGGgcaaaatgaaaaggaaggCATTGAGGAGGAAGCGTTTACAGAGTGTCCCACAGGCAGAGAGTCCTCTGGCAAGTGGCCAGGAAGAGCGAACAAGAGGGGCCAGCACGGGCTTTCAAATGGCCCAGTCACGGATGACATTGGCAGTGTCACAGGGACTCCAAGTATTGAGGAAGCTTTGAAAATCATTCACAATTCTGGGAAACCCCACAGTGTACTTCAATCTGACAAGGTCAACAATGGATTTTTCCTCCATAGTCAGGATTTAGGAGATTTGGGTGCAAAGCCTAAAATGGAAGAAGCTGGTTTGGATTCGGTGGCAGAGACTAAGGGAGCTATGAGTCCTGATACTACAGAGGTGGACACGGGGATTAACGTGCGCACAGAAGATATTCAGGAGACCATGGACGAGGACTCCTCTCTGAGGGATTACACTGTGAGTATGGACTCGGACATGGACCATGACTATGAGTTGAAACCTGGCCACCCCAGGGAAATGACAAGCCCGTGTCCCAGCTCAGTCAGTACCAAGTCTCAGGCTGGGAGCACCGCATCCTCAAGCTCTGGGGTCAAGATGACCAGCTTTGCGGAACAGAAGTTCAAGAAGCTGAACCACGTTGATGGCAGGAGCAGCGGAAGCAGCTCCCAGAAAACCACTCCAGAGAGTTCGGAGTTAAATATCCCTCACATGGTGGCCTGGGCTCAAACCCCAGAGGAGAGCCCAGTCCGAGCGGCAGGGAGGGATCCCACCCAATTGTTGGCATCGGAGATGGTACAGCTGAGGATGAAGCTGGAGGAGAAGCGCCGGGCCATTGAAGCCCAGAAGAAGAAGGTGGAAGCAGCCTTCACAAGGCACAGGCAGAGAATGGGCAGAACAGCATTCCTGACCGTAGTGAAGAAAAAAGGAGACGGCACGTCACCTCTGAGGGAGGAGGCTGCTGGCTCAGAAGATGAGAAACTCTCCATGGAAAGCCAACCCTTTAAGGTGGCAGCAGACAACAACCTCAGGCCTGggaaatgtaaaactgaaattccAGATCATGTGGACCAGGCTCAGAACAGATGGCTGAAGTCTCCCAATGATGAGAGCTTGGGAGAAGTCGACCTGGTGGAGTACACCAAGTCCATTGAGAAACTCAACACATCTCTGAACTTCTTGCAGCAGGAGATGCAGCGCCTGGCTCAGCAGCAGGAGGTGATCATGCAGATGAGGGAGCAGCAGACGTGGGTGATCTCTCCTCCTCAGCCCTCTCCCCAGAAACAGATCCGGGAGCTCCGCACTGCCACCCGATCCACCGGATCCTTGTCGCCGGTGTTGTCCTCAGCAGAGTCTCCACGGACGTCCCACCGATCCCCAACGAGCATAAAGAGGAAATCTGCGTCCTTCCACTCCAAGACCCCAAGGACTCCCAGgccaaatgaattaaaaattgCTCCTCTCAACCGTATTCTAAACACGCCCCAGTCAGTCGATAGCCTCCCTCGCCTTCGCAGGTTCTCTCCCAGTCAGACCCAAACGAGCTCCTTCGTGTGCCTTGGTGATGATGCTAGCTTTCCCACTGAGACCTGGACCAAGGAGAAATATGCCACACAGGAACTCAAAGCAGCTCTATATGCAGAGGCAGAAGGTTCAGAGAAGAGTGAGTATGTGAAGCCAGCTGGCAAACCCAACAAGAGGGAGGAGTGGACAACAAGTGAGAAGGTTGCAGAGGCCGAGCTGGATAAGGAGATGAAGCCCATTGAATCCACAGTCTCAGAAGTGTTATCTCAGCCAATAATGGAGACGTTTACAGTTACCCCCACAGAAAACCCAAGTGATCTTATCGGCCAGAGTACTAGGAACCTGATTGAGGTTCCTCTGTCAGTGTTGAAGCCTCTGGACGGACAGGAACTGGAGGAAGTGGGAGAAGGGGAAACAGGTGGAGAGATGTACGATGAGGACCAGAAAATGTGCTGTGGATTCTTTTTTAAGGACGACATGAAAGGAGAGGACGACATGGCGCTGAAGCGGGCGGCGCTGCTGGAGAAGCGGCTGAGGCGAGAGAAGGAGACGCAGCAGAGGAAGCAGCAGCTGGAAGCGGAGCTGGAGCAGAAGAAAGAGGAAGCCCGGGTCAAGGCTGAAGAAGAGCGTCAAAAGAAAGAGGATGAGAAAGCACGCCGAGAGTTCATCAAGCAGGAATACCTCAGGAGGAAGCAGCTCAAGCTGATGGAAGACATGGACACGGTGATAAAGCCGCGCCCTGCCAGCTCCAAACCGAAGAAACCTCGTCCCAAATCTGTGCACAGGGATATAATGGAGTCCCCCAAAACCCCCGTCAGGGCACCGGCAGTCTCCAGCCTCTCTCTGGCCTCCCTGAATTTGGCCGACACTGACAGCGTGCACTCGGGCAAGAGGACGCCCAGAAGCAGTAACATAGCCTCTGGCAACCTTTACTACTTATTGAAATCTTCTAAACTGAAAAAGGCAAGGCCGGAGTCCGCCGATGGGTTTTTATCACCATGTCGTTCAGGCAGTCGCAATGGAGAGAAGGACTGGGAAAACGGCTCGACGACCTCTTCTGTGGCTTCCAATACAGAGTACACAGGGCCAAAGCTGTACAAGGAACCAAGTGCAAAGTCTAACAAGCACATCATCCAGAATGCTTTGTCTCATTGCTGTCTGGCAGGCAAAGTAAACGAGggccagaaaaataaaatactggagGAAATGGAGAAATCAGAGGCCAACAACTTTCTGATTCTGTTCCGGGATTCTGGGTGCCAGTTCAGGTCACTGTACACGTACTGCCCAGAAATGGAGGAGATCAACAAGCTGGCTGGCATTGGGCCCAAGTCCATCACCAGGAAGATGATCGAGGGGCTGTACAAATACAACTCTGACCGGAAGCAGTTCAGCCATATTCCTGCTAAAACCATGTCCGCAAGTGTCGACGCCATTACCATTCACAGTCACTTGTGGCAGACCAAGAAACCAGTAACGCCTAAAAAAGTTCTACCTTCCAAGTCATAGTAgtattgaacttttttttttttttatcaaaacatTCATGTTCAAATTGCACTTCACCTTAAATATCCATTTGGATTAGGCTGCTTTTGCTGCCAATGGACAACTAAAAGTatatcctgttttatttttcccagattttgtttttttccctcttagTTTGAACTGGACCCAGAACTCTACTGTCGTTATGCACAACTGGAATGTAAAACACTATTTAAGAGTATGAAATTGACATCACTAATGTGTTTAGTACAAAGAGATCATGAAATAGGAGTAATTTTATTAAagcacgcgtgtgtgtgtgtgtggttttgtatGTGCCAACAGAAAAGGTATGgatgtcatattttaatttggtacACTGAAGCACTGAATGTCAAACATCTGTATAGATTGAATTTTCATATCTGTTATCATTTGTGGCCttatgcttgttttattttgtatgcgaCTGCCATCAGGTGTTTGTGAGTTTGTTGTCTCATGAAAGGTTTTTGTCCACAAGTGATGCTTGTTACTTTATCGTGGTAGAAACATAACGTGTTAAGAGAAAGAAGATAAATGAGAAGTGTCCGGGGGTTCAGGGGTTCCAGGGAGATACCTTTACCAAATGTATTAGGTTCTACAGGTTTTGGATGAAATGTAGAATCAAAACAAGTCACTACATAAGTATTTATTCGTTTTTAGCAACTGTCAAAGGCAACAAACCCCtcatatatatagtgtttttgtttgtttatcctTAAAAAGTATGCTGTTTTACTCACATTTTCTCAACAGTATTGCACAATTTGCTTCAGGAAACATATGTTCACATCTACAGTCCAGGCAATATATAATTGACTGATTACAGACTATTACTGAACACAGAGCCTCTTTTACTCTTTAGCAAATACTAGTATTCAGTCAGTAGAGCTCAGTATTAGATCTGCTTAGTTTGGATTGTTTAGGTAGTTCCCAAAAACTCTGTTGCATATACATTAAGGAACGTACAACAGTAGACTTAATTGTCAATACAAGGCAAATGTAACTTTTGTAAATGTGGCGTCATATTCGGATCTCTTAATGAAAAGAGGCAAAGCCGGCAAGTCAAGCCAGAAGGCTTCACTTACCTGTTGTAAGCAGATTAGATATTGGTTCTAgacaattttaaatatagatttaataTACTGTCTATAAAGACAATATTTAACTAGTTTACAAttgtaaataatttgttttaatcaaggTGAATTATGAACACTGAATTCCAGTTTTCTTCCTGACTGCCATTTTCAACTGCTTAGTATGCTATGTGTCTGTATACAGCAGGTCTTATTACAACGCCGTGTTTCATGTCTGAAGGGTTGTGTCTATCATTGCTTATGTTGCCATTTTTTCTTTACTggttgaagaaaaaatatgtacttttatttCTACTTTATTGTGTTTCCCTTCATCAgtgtgtatactgtacatattttgGGCATATAAAGTATTTCATTGCTGAACTGTTTCCGTGTATGTGAGACCTATCCTCCCATCTTCTCTTTCTATAGTATGGTCTTccactaaatatatttaatcaatatggAAGCtcatgagaaaacaaataacttgAAAGTTTGGAAGGAAACCAGTTCACATACCTCCAGAATGCAGACAACcatctgtttttgtattaaaaaaaaaaaattttaaCCCCATATTGTTTGTCATCACAATTACCTAATTAAATAAGAGGCGCAGTGGGGTCTGCATGGGGCTAGATAACCAATTAGGGTGGGACAGAATATGCCCTTTTtttatcaaaagaaaataaatctgtcaagGTTCTTTGTTGTCATTACATAATGATATTCGTTAATGATGAATGGTTATGTGTTCTCGTGTATTCCAACTTAGGGTCAtccttttgaaatatttttttaaatgttatgataaTCAAGATGTGCAGTTCATCCAGTTTTTACATGCCATCCAATAGTTAAATTTATGTTCTTCTTTAACCTGTATCGAAAGAACGTTTTCATCTACTTAAAAAAGTCATCGTTTTACGAAATGAAGAGTGAtgtggttaaataaaaaaaatatatataaaaggtttGTCATTGGCTTATCCATACTATCTGCATGAACAAGGTAAAGATATGTAATTCtcaaaaattaaaactgtataaataaatgtatataaacctAAACGAGGGACTAAAATGCACATATATTCTGCCTGTAGACATGTCACAACAtgccattatttaaaaaagcagacgTAGGTGTTGGCAGAATTACAGATCATAACGAGTGCAGGCAGAATGTTGTACTTAAAGCAGACTATTTTAAGACAAGTATTGGCATAACTGTCTAGGTTAAACCATCAGCATtcccattgttttaaatgattttaattactttgaaatTTACACTTTGGATTGTACCCACACTCTGTAAATAAATCCAGTTTAAATACACTTGAACCCTTTTTTATGTCCTGATATCATGTATTGTAAACAATATTGTGGATTAAGAGATGGCACTTCTTATTTGATCCATTTCTTTCACTTGCACTAGTGTAGAGGACTTTTCTAGAGATGCATCACTTTGCAACAGTTctgatatattttcttgttttgattgCATGTAGTATATTTCAGTGATGCCATTTGAGTTTAGTATTCTGTAGGCATAAAATGCTAGTGaacatgttcatttattttcttaactgtTGAATTGATATTagaaaatggaaatataatttatacaggTTGCTTTCCAATCTTGTACATATAAAGtccaatttgaatattttgcccaaataaaaagtgtcatatattttaatctgcagCTGATAATGAGACTGATCAgggtttaactttattttaaaactgctcATTTGTAAtcgtgttcattttaatttttctcttcTCGCCAAGTAACGATTCAGTGGCATTCCCTTGTACAATGTCTAAAGGTAGAATGTGCCTGACTATTTCTCTGTGTATTGGTAGAGAATTGTTGCTGTATGTTATATAAGTATGactattttcctttcttttctaaGCCTGCtagttttataattatatttaatcatcTTTAGTTTTGCGGGTTACCAGAAAACCTTATGCAGGTGGCAGATTTGAATGTCTGTCTCTAACACAAACACTGGTGCTCTCAGCGGGGTTTATAGAATTGCCAAACAagcagttgtgtgtgtttctgggacaaaaataaataaaagagtacTTTAAAAATCAGCAGTTACTTTGGTTACTGAAGCCTTTTGGGTTTCATTATGTTGAAAGAGGTATTATTTTAGGACAGCTAGTATAGTTGTCTTACTTGGCTGTTTAAAGCCAAAATGAATAgctatttaattgtaaatgggCACTGTTGAttattgtacagtgtgttgtgtgctaATCTGTCCACCTTGATGGAGCATTGCTTCAATTTTTTCAGACGCTGTGCTGTCATATATTGTCAACATATTGCTGAAGTAAcatgtagttttttgttttttttccttttgcatcaaataaaatgaagcatGGCCTCAAA

Function

GO: NA

KEGG:

id description
K17493 CAMSAP; calmodulin-regulated spectrin-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005163 True 7596 mRNA 0.43 16 17064599 17087674

Neighbor

gene id symbol gene type direction distance location
AMCG00005164 wdr47,LOC102290984 coding downstream 2042 17048045 ~ 17062557 (-)
AMCG00005165 NA coding downstream 31173 17005310 ~ 17033426 (-)
AMCG00005149 NA coding downstream 84241 16975583 ~ 16980358 (-)
AMCG00005150 NA coding downstream 103730 16954875 ~ 16960869 (-)
AMCG00005151 NA coding downstream 120423 16920469 ~ 16944176 (-)
AMCG00005162 camsap2,LOC105906931,LOC107679834 coding upstream 13853 17101527 ~ 17109305 (-)
AMCG00005154 nr5a2,rtftz-f1,LOC106613481,LOC106574163 coding upstream 137083 17224757 ~ 17241719 (-)
AMCG00005153 nr5a2,LOC106613481 coding upstream 174240 17261914 ~ 17278554 (-)
AMCG00005156 NA coding upstream 313895 17401569 ~ 17433655 (-)
AMCG00005159 nek7 coding upstream 386848 17474522 ~ 17491386 (-)
G145760 NA non-coding downstream 99525 16964203 ~ 16965074 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 689182 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 1797651 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 1806935 15255889 ~ 15257664 (-)
G145434 NA non-coding downstream 1809711 15253513 ~ 15254888 (-)
G145995 NA non-coding upstream 937091 18024765 ~ 18025674 (-)
G146022 NA non-coding upstream 1210173 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 1264193 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 1996321 19083995 ~ 19086041 (-)
G146227 NA non-coding upstream 2130717 19218391 ~ 19219758 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 1085744 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 1529454 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 2095357 14964414 ~ 14969242 (-)
G145046 NA other downstream 3727853 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 4716271 12344671 ~ 12348328 (-)
AMCG00005158 NA other upstream 455472 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 1654210 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 1925403 19013077 ~ 19024461 (-)
G146313 NA other upstream 2482385 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 2670558 19758232 ~ 19761446 (-)

Expression


Co-expression Network