AMCG00005171


Basic Information

Item Value
gene id AMCG00005171
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 17982339 ~ 17983368 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005171
ATGAATTCCGCTTTGGCAAAGAAACTGATAGTAAAACCGCAGAAGAGAATAATTGTTGCCTGTTCTCAACtctcttctttgttttgtttaggatCTCGAACCCCAATTGTCATCATCCCTGCAGCTACGACTTCATTAATCACCATGCTTAATGCAAAAGAACTTCTTCAAGACCTGAAGACTCGTGCTAAGCCAGAGTTCAGGACATTGACAGCTGTTGACCGAATCGCTGCGCTCAGCCGTGCTTCCCCAGACCCGGCCGTTGAGAAGGATCAGGCCAGACCAGACAGACCAGCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005171 True 300 mRNA 0.47 2 17982339 17983368

Neighbor

gene id symbol gene type direction distance location
AMCG00005170 cdc73 coding downstream 6690 17972354 ~ 17975649 (-)
AMCG00005174 NA coding downstream 206913 17761420 ~ 17775426 (-)
AMCG00005177 NA coding downstream 237552 17735308 ~ 17744787 (-)
AMCG00005175 NA coding downstream 247115 17707718 ~ 17735224 (-)
AMCG00005176 NA coding downstream 282620 17694183 ~ 17699719 (-)
AMCG00005185 cdc73,LOC101483205,LOC105941386,LOC106633477 coding upstream 28160 18011528 ~ 18022231 (-)
AMCG00005184 NA coding upstream 44875 18028243 ~ 18036344 (-)
AMCG00005183 NA coding upstream 63323 18046691 ~ 18049244 (-)
AMCG00005187 NA coding upstream 80461 18063829 ~ 18066368 (-)
AMCG00005186 NA coding upstream 87064 18070432 ~ 18073923 (-)
G145760 NA non-coding downstream 1017265 16964203 ~ 16965074 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 1606922 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 2715391 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 2724675 15255889 ~ 15257664 (-)
G145434 NA non-coding downstream 2727451 15253513 ~ 15254888 (-)
G145995 NA non-coding upstream 41397 18024765 ~ 18025674 (-)
G146022 NA non-coding upstream 314479 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 368499 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 1100627 19083995 ~ 19086041 (-)
G146227 NA non-coding upstream 1235023 19218391 ~ 19219758 (-)
AMCG00005158 NA other downstream 436007 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 2003484 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 2447194 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 3013097 14964414 ~ 14969242 (-)
G145046 NA other downstream 4645593 13336209 ~ 13336746 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 758516 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 1029709 19013077 ~ 19024461 (-)
G146313 NA other upstream 1586691 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 1774864 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 2015799 19999167 ~ 20023507 (-)

Expression


Co-expression Network