AMCG00005178


Basic Information

Item Value
gene id AMCG00005178
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 18103258 ~ 18109453 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005178
AAGGGACTCCACAGACAAGTCTTGCAGTCGAGCTTTCAATGCCTTTTTTGAAAActgacagacacaaagaaaCTGGATTCGTGCAGGACGCCATGTCACCGCAGTCCAATTTCCTGGCGAAGGAAGTCATATCATGGGTGGGGAAAACCAAGCACCAATCGGGCTTTAAAAGTGAAGAGTTTTCATTTGCTGgttaaaacatatacacaagCCTATGAAGAAAGAACAGATACCCATGTACAAGAAGAGCATGgaaattgttctgtttttgtttcctcaaCTGAACTTCTCTGCCCCTAAAGAGGAAGCTTATTTCAAAATGCTCAGTCCAGGCGATATACAGGTCTTGAGGAAGAAAGACAACAAAACCAGggttaaagaaaaagaaaaaaagaccagACTCAGTCTCCTACTGACCAAATCAGGATCTCATGAAAATGTTAACCCAGAATCTAAGAACCCGACGAAAAGCATCACACCAGCAGCTGCGTTGAAATGGAGGGAGTCCTTTGAGGAAATGCTAGATCATAAAGATGGACTGGAAACCTTTACCACGTTCCTGAAGACCGAGTTCAGCGAAGAAAACATCGAGTTCTGGTTGGATTGTGAGGAATACAAGAAAATCAAGTCACCCACTGAACTGGTCTCCAAAGCTAAAAAGATGTACGCAGTGTACATTGATACAGAGGCCCCTAAAGAGATTAACATTGACTTTTCCACAAAGACGGCAATAAAACAGAACATCCTAAAGCCCACGCACTCCTGTTTCGAGGCGGCACAGAGCAAAGTCTACAGTTTAATGAAAAAGGACTGTTACCCAAGATTCCTCAAATCTGATATGTATTTCAACCTCACCAAGACGTTACCACCGCCCAGCATGTCCCGGAGAAGATCGCGGTCGTGCGTTTTCAATGACCGGAGTGAAGCAGAAACCGAACTGGGCATCTGGTTGTAGTTGATATCTGGTTAATGAACTTTGTAGGTTTATCAGCAGCACATCCAGGATAAAGCTTTTCAAAGACCAAATCATCATGTGATTAACTCAGCGTTTTCTTCtatcaaaaccaaaataacactttaccagctatttattaacatttcacATTGCTGTTTTTGCCTGTGGctttaacttaatttattaatgtaattattgattCTTATGCCTCAGcaactgatttatttaataatttataatgacATTTCCATCATGTTTGTACATTTCCCTACcaacatatgtaaatataagcaaaatgtgatattaataatgaataaatccTTCAAATATCTTTACA

Function

GO:

id name namespace
GO:0048839 inner ear development biological_process

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005178 True 1292 mRNA 0.40 6 18103258 18109453

Neighbor

gene id symbol gene type direction distance location
AMCG00005179 NA coding downstream 14143 18087405 ~ 18089115 (-)
AMCG00005186 NA coding downstream 29335 18070432 ~ 18073923 (-)
AMCG00005187 NA coding downstream 36890 18063829 ~ 18066368 (-)
AMCG00005183 NA coding downstream 54014 18046691 ~ 18049244 (-)
AMCG00005184 NA coding downstream 66914 18028243 ~ 18036344 (-)
AMCG00005193 NA coding upstream 433098 18542551 ~ 18545413 (-)
AMCG00005196 NA coding upstream 569613 18679066 ~ 18684796 (-)
AMCG00005209 NA coding upstream 624507 18733960 ~ 18738143 (-)
AMCG00005208 NA coding upstream 666015 18775468 ~ 18781565 (-)
AMCG00005202 NA coding upstream 697618 18807071 ~ 18813335 (-)
G145995 NA non-coding downstream 77584 18024765 ~ 18025674 (-)
G145760 NA non-coding downstream 1138184 16964203 ~ 16965074 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 1727841 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 2836310 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 2845594 15255889 ~ 15257664 (-)
G146022 NA non-coding upstream 188394 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 242414 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 974542 19083995 ~ 19086041 (-)
G146227 NA non-coding upstream 1108938 19218391 ~ 19219758 (-)
G146257 NA non-coding upstream 1354554 19464007 ~ 19464975 (-)
AMCG00005158 NA other downstream 556926 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 2124403 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 2568113 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 3134016 14964414 ~ 14969242 (-)
G145046 NA other downstream 4766512 13336209 ~ 13336746 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 632431 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 903624 19013077 ~ 19024461 (-)
G146313 NA other upstream 1460606 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 1648779 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 1889714 19999167 ~ 20023507 (-)

Expression


Co-expression Network