AMCG00005179


Basic Information

Item Value
gene id AMCG00005179
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 18087405 ~ 18089115 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005179
TCATGTGCCAATTAGGGATTAATTTGgagcaaaacatatttgtgaAGACTTCACAAGTAAAAGATCTCAATGCTATTTTCAAGGggACCCTCTTGAAGAAGTTTCGGTATGGTCTGAGTCAGTGGACAAACTGCTGGAATGTAAATATTGCCTTCAGGGAGTTCTTAAAAACAGAGTACAGCGAGGAGAACATATTGTTTTGGCTGGCCTGCGAggaatacaagaaaataaagtcAACCCCTAAAATGGTCTCCACGGCCAACCAGATCTATACAGAGTATGTTCAAGTGGAAGCGCCTAGACagATCAATATTGACTGTGGGACCAGAGAATATATCACACAACATATTTCTGAACCAAACATCAATTCTTTTGATaatgcacagaaaataatatatggTCTTTTGGCAAGAGACTGTTACCCAAGGTTCCTGAAATCAGAGATCTACCAGGCAATTTTAAGAAGACCGCAGAAAACCATCAAGAAAAGA

Function

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005179 True 491 mRNA 0.39 4 18087405 18089115

Neighbor

gene id symbol gene type direction distance location
AMCG00005186 NA coding downstream 13482 18070432 ~ 18073923 (-)
AMCG00005187 NA coding downstream 21037 18063829 ~ 18066368 (-)
AMCG00005183 NA coding downstream 38161 18046691 ~ 18049244 (-)
AMCG00005184 NA coding downstream 51061 18028243 ~ 18036344 (-)
AMCG00005185 cdc73,LOC101483205,LOC105941386,LOC106633477 coding downstream 65174 18011528 ~ 18022231 (-)
AMCG00005178 NA coding upstream 14143 18103258 ~ 18109453 (-)
AMCG00005193 NA coding upstream 453436 18542551 ~ 18545413 (-)
AMCG00005196 NA coding upstream 589951 18679066 ~ 18684796 (-)
AMCG00005209 NA coding upstream 644845 18733960 ~ 18738143 (-)
AMCG00005208 NA coding upstream 686353 18775468 ~ 18781565 (-)
G145995 NA non-coding downstream 61731 18024765 ~ 18025674 (-)
G145760 NA non-coding downstream 1122331 16964203 ~ 16965074 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 1711988 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 2820457 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 2829741 15255889 ~ 15257664 (-)
G146022 NA non-coding upstream 208732 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 262752 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 994880 19083995 ~ 19086041 (-)
G146227 NA non-coding upstream 1129276 19218391 ~ 19219758 (-)
G146257 NA non-coding upstream 1374892 19464007 ~ 19464975 (-)
AMCG00005158 NA other downstream 541073 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 2108550 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 2552260 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 3118163 14964414 ~ 14969242 (-)
G145046 NA other downstream 4750659 13336209 ~ 13336746 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 652769 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 923962 19013077 ~ 19024461 (-)
G146313 NA other upstream 1480944 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 1669117 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 1910052 19999167 ~ 20023507 (-)

Expression


Co-expression Network