AMCG00005190


Basic Information

Item Value
gene id AMCG00005190
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 18473181 ~ 18480920 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005190
ATGAATTGCTGTAAACGTGGCACCTGGGTTTACCCGACTGTGCTCCTCTGTGTGTATGGATTTTTCTCCATGATGAGGCCATCAGAACCCTTCCTCACACCGTATCTAACCGGATCATATAAAAACCTCACAATTCATCAGGTTTCCCGGCAAGTGTATCCAGTGTGGACGTACTCGAACTTTGTGATTTTGATCCCGTGCTTCTTATTGACGGACTATCTCCGATACAAGCCCGTTATTATTCTGCAAGGCCTGGGGTACATCGCCACATGGCTCTTGCTGTTATTTGCCCCGGGGGTCCTGGCCATGCAGTTCATGCAGGCTACCTACGGCATCGTCACAGCGTCAGAAGTGGGATATTACTCCTACATCTATAGCGTGATCAGTCTGAAGTATTACCAGCGAGTAACGAGTTACTGTCGGAGCATAACTCTAGTTGGGTACACCTGCGGGTCCGTGCTGGGGCAACTGTTGGTCTCCTTGGGGAAAGTGCACTACTTTTACCTCAATGTGATATCCCTCACATCTGTCTCCATTGCCTTCCTCACCTCGCTGTGGCTGCCCATGCCTCAGCACAGCCTGTTCTTTCACAGAAGAGACGTTCAAAGCAGCCGCGCCGAAGAGGTGACGCCCAATTCACAGATTGATGGTGAAAATACCTCACCGCCTTCCTGTGGCCCTCGTACTGAAGAGAAGAGCAGGAATGCCTTTGTGGAAGCTGTGTTGGCACTCCTGGTGGACTTTAAAGAGTGCTACTCCTCCAGAAACCTGATTTACTGGTCGTTGTGGTGGGCGCTGGCAACGTGTGGCTATTATCAAATTTCAAACTATGTCCAGGTACTCTGGCACCATAAGTTACCCTCCAAGAACTTTACATTGTACAACGGTGGAGTTGAAGCAGTTGCCACCCTTACAGGGGCCGCTGCGTCCTTCGCCGTTGGTCATGTCAGACTTGATTGGTCCGTTTGGGGCGAGCTGGCCTTGGGTTTGTTTTCAAGTCTGAATGCTGGTTCTGTGTACCTAATGGACATGACAGGCAACATCTGGGTGTGCTACGCCTGCTACGTGattgCTAAAAACTTAACCAAGGAGCGCTACGCTTTAATATTTGGGGTAAACACTTTTGTGGCCGTCGCGCTCCAGTCCATACTGACGGCAGTTGTCATCAATACCAAGAGCCTCAATTTAAGCATTATGACTCAGTACTTTATCTACGGCTCGTATTTTGCTGTCATTGCATTGATTTTCCTGGGAAGAGGAATCTACACTGTGGTTTATATGAAGTGTATCAAGAAAGAAGACAGTATTGCTGAA

Function

GO: NA

KEGG:

id description
K14610 SLC19A2_3, THTR; solute carrier family 19 (thiamine transporter), member 2/3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005190 True 1314 mRNA 0.49 5 18473181 18480920

Neighbor

gene id symbol gene type direction distance location
AMCG00005189 LOC107711117,LOC108441513 coding upstream 54600 18401193 ~ 18418581 (+)
AMCG00005180 brinp3a.2,LOC105906059,LOC106560299,LOC107711116,LOC107732449,LOC108440126,LOC105024861,LOC107667973 coding upstream 251633 18202351 ~ 18221548 (+)
AMCG00005181 uchl5 coding upstream 431351 18036473 ~ 18041830 (+)
AMCG00005182 NA coding upstream 446662 18023624 ~ 18026519 (+)
AMCG00005188 NA coding upstream 478776 17993122 ~ 17994405 (+)
AMCG00005191 NA coding downstream 23966 18504886 ~ 18507716 (+)
AMCG00005192 rgs5a,LOC107732440,LOC108441543,LOC107083032,LOC107564083 coding downstream 45176 18526096 ~ 18536227 (+)
AMCG00005194 nos1ap,LOC107692421,LOC107711121,LOC107551033 coding downstream 149494 18630414 ~ 18635052 (+)
AMCG00005195 nos1ap,LOC107711121,LOC107551033,LOC107692421,LOC108271954 coding downstream 164525 18645445 ~ 18664265 (+)
AMCG00005206 uap1,LOC106584139 coding downstream 203288 18684208 ~ 18695706 (+)
G146021 NA non-coding upstream 175078 18297874 ~ 18298103 (+)
G145975 NA non-coding upstream 401406 18020892 ~ 18071775 (+)
G145960 NA non-coding upstream 613546 17859136 ~ 17859635 (+)
G145925 NA non-coding upstream 710722 17729788 ~ 17762459 (+)
G146043 NA non-coding downstream 60336 18541256 ~ 18542840 (+)
G146088 NA non-coding downstream 275155 18756075 ~ 18756595 (+)
G146090 NA non-coding downstream 276747 18757667 ~ 18757871 (+)
G146091 NA non-coding downstream 283123 18764043 ~ 18764298 (+)
G146140 NA non-coding downstream 412147 18893067 ~ 18896727 (+)
G145932 NA other upstream 701656 17765257 ~ 17771525 (+)
AMCG00005105 LOC102220226,LOC108442892 other upstream 3088370 15379599 ~ 15384811 (+)
AMCG00005060 LOC106599426 other upstream 4284852 14155155 ~ 14188329 (+)
G144940 NA other upstream 5692011 12780580 ~ 12781170 (+)
G144677 NA other upstream 6809813 11662681 ~ 11663368 (+)
AMCG00005199 wdr78 other downstream 334109 18815029 ~ 18821642 (+)
AMCG00005232 dock7 other downstream 994219 19475139 ~ 19530453 (+)
G146305 NA other downstream 1098653 19579573 ~ 19579807 (+)
G146519 NA other downstream 1701434 20182354 ~ 20184643 (+)
AMCG00005272 mast2 other downstream 1772089 20253009 ~ 20279786 (+)

Expression


Co-expression Network