AMCG00005191


Basic Information

Item Value
gene id AMCG00005191
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 18504886 ~ 18507716 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005191
GGCTCCACACAGCACAGACCTGCGACTGCACACTAACCCCTGAGCATCTGAGGAttaactgctctctctctcgccttcACAATGTGCAAAGGGCTTGCATCCCTGCCATCCACCTGCCTTGAGAGGGCCAAGGAATTCAAGGCACGCCTGGGTATTTTTCTGCAAAAGACAGAATTCAGCCATCACGGAAGCTCAAACAAAGCCGACAAGCTCAGGCCTACGCAAGAAGAGGCTCTGAAATGGAAAGAGTCGTTTGAAAAACTCCTTGAAAGCAAACATGGTTTATGTGCCTTCAGAGCTTTCCTGGTATCCGAATTCAGCGAAGAGAACATCGCTTTCTATCTGGCCTGTGAGGATTACaggaatacaaaatcaacagccAAACTGGAGGCAAAGGCAAAGAAAATATACgaagaatacattaaaagcgACGCCCCAAGAGAGGTGAACATTGACCATGAGACCAGACAGATCACAAAGGACAACCTTGAGCATCCCACGCTCGCGTCCTTCGACCTGGCGCAGAATAAGATCTACACGCTCATGGAGAAGGACTCTTATCAACGTTTTCTGAGATCGTCCCTCTACCAAGACTTGACCACCAAGCCCAGCAACACGAAGTTGCACACATGAGACCCCCCCCGCATTGGCCTGCGGTTCAGAAACAAGGTGGCGAGGCATAGGGAAGCCCAGTCCATACTGCAACGCGTCAGTCAGTACAGGAAGTCCAATACTGCCTTGGGCAAAGGAGGGAATAAGTTAGGTACATACGAATCTACCGAAAGCTTTTCCACCTGATAATAGTAAAGACTCAGTCCGAGAACTAAGCTGTTTGGGacacagaagggtgaaagaacgATTTTGAATGTTGGGACGCTCCGTAACGCAACTGGagaagtgttttatttcaatatttgacaCAAGAAACACCATTTTGAAAGCTGTTActactgattttttttgtattctttgtactcttgtgtatttatttattgatgtatttatttatttaaatgtgacacattgcaagaaacgattatccttatttatttgtaaatgtttaaagtcAATTGATACAGTCTATTTATTGCACAATTGAGAAAAATATGGCAATGTTTTATTCCATGGTTTACATGAATATGCTCACCAGATATCTGAGTGTTGGAGAAGTATTTGCTGGatcactggaaaaataaaatgtttgtatggTACACAAATAAACCATAATATCAGCCCCCttggttttaatgttttcacaCATACTATCTCcaatcattttattataatagaGATACGTATTTTATGTCGACACACATTGTAAGATATTCATACAAAactaagtaaatgtattttcttcctctcataattgaaaactaaaatatacagGTCATGTTGGACATGCTACATATGATACAGGTGTTGCACTAGCATGTTTTACAGACATGCAAAACATCTGTattctatttatctatctatttgtAATCTTGTAATTCAGTGACGTCGTTAAAAAACAGTTCAGCTGTCAGTGTAAGAATCTCTGTACCACATTTTTGCTTGTCTCTATTAAATCAGA

Function

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005191 True 1573 mRNA 0.41 5 18504886 18507716

Neighbor

gene id symbol gene type direction distance location
AMCG00005190 NA coding upstream 23966 18473181 ~ 18480920 (+)
AMCG00005189 LOC107711117,LOC108441513 coding upstream 86305 18401193 ~ 18418581 (+)
AMCG00005180 brinp3a.2,LOC105906059,LOC106560299,LOC107711116,LOC107732449,LOC108440126,LOC105024861,LOC107667973 coding upstream 283338 18202351 ~ 18221548 (+)
AMCG00005181 uchl5 coding upstream 463056 18036473 ~ 18041830 (+)
AMCG00005182 NA coding upstream 478367 18023624 ~ 18026519 (+)
AMCG00005192 rgs5a,LOC107732440,LOC108441543,LOC107083032,LOC107564083 coding downstream 18380 18526096 ~ 18536227 (+)
AMCG00005194 nos1ap,LOC107692421,LOC107711121,LOC107551033 coding downstream 122698 18630414 ~ 18635052 (+)
AMCG00005195 nos1ap,LOC107711121,LOC107551033,LOC107692421,LOC108271954 coding downstream 137729 18645445 ~ 18664265 (+)
AMCG00005206 uap1,LOC106584139 coding downstream 176492 18684208 ~ 18695706 (+)
AMCG00005205 ddr2,ddr2a,LOC106584138,LOC106560289 coding downstream 205689 18713405 ~ 18726215 (+)
G146021 NA non-coding upstream 206783 18297874 ~ 18298103 (+)
G145975 NA non-coding upstream 433111 18020892 ~ 18071775 (+)
G145960 NA non-coding upstream 645251 17859136 ~ 17859635 (+)
G145925 NA non-coding upstream 742427 17729788 ~ 17762459 (+)
G146043 NA non-coding downstream 33540 18541256 ~ 18542840 (+)
G146088 NA non-coding downstream 248359 18756075 ~ 18756595 (+)
G146090 NA non-coding downstream 249951 18757667 ~ 18757871 (+)
G146091 NA non-coding downstream 256327 18764043 ~ 18764298 (+)
G146140 NA non-coding downstream 385351 18893067 ~ 18896727 (+)
G145932 NA other upstream 733361 17765257 ~ 17771525 (+)
AMCG00005105 LOC102220226,LOC108442892 other upstream 3120075 15379599 ~ 15384811 (+)
AMCG00005060 LOC106599426 other upstream 4316557 14155155 ~ 14188329 (+)
G144940 NA other upstream 5723716 12780580 ~ 12781170 (+)
G144677 NA other upstream 6841518 11662681 ~ 11663368 (+)
AMCG00005199 wdr78 other downstream 307313 18815029 ~ 18821642 (+)
AMCG00005232 dock7 other downstream 967423 19475139 ~ 19530453 (+)
G146305 NA other downstream 1071857 19579573 ~ 19579807 (+)
G146519 NA other downstream 1674638 20182354 ~ 20184643 (+)
AMCG00005272 mast2 other downstream 1745293 20253009 ~ 20279786 (+)

Expression


Co-expression Network