AMCG00005230


Basic Information

Item Value
gene id AMCG00005230
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19623255 ~ 19627636 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005230
ATGAAGGTCAGCATCTCCTCTGGGATGTTTGGTTCAGTCAGGGCTTCTGccAAGAAGACCTGTGCCACGACGGACTTCGCCTGCAAGAACGGGCAGTGCGTGCCGGCCAGGTGGCGATGCGACGGCGAGGCGGAGTGTCCCGATGGCTCGGACGAATCGGAGTCCACCTGCAGTAAGTACCCAGTCGCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005230 True 192 mRNA 0.61 2 19623255 19627636

Neighbor

gene id symbol gene type direction distance location
AMCG00005228 NA coding downstream 22972 19575236 ~ 19600283 (-)
AMCG00005233 NA coding downstream 93573 19523812 ~ 19529682 (-)
AMCG00005234 NA coding downstream 130740 19488650 ~ 19492515 (-)
AMCG00005227 NA coding downstream 147812 19466196 ~ 19475443 (-)
AMCG00005222 foxd3,LOC107717135,LOC107591180,LOC107692383 coding downstream 255990 19366141 ~ 19367265 (-)
AMCG00005229 NA coding upstream 36465 19664101 ~ 19669052 (-)
AMCG00005241 NA coding upstream 99308 19726944 ~ 19741365 (-)
AMCG00005250 LOC103463064,LOC103355575,LOC104919037,LOC103137203,LOC101157045 coding upstream 157238 19784874 ~ 19799356 (-)
AMCG00005249 NA coding upstream 172098 19799734 ~ 19805056 (-)
AMCG00005251 orc1 coding upstream 219155 19846791 ~ 19855209 (-)
G146315 NA non-coding downstream 12250 19610766 ~ 19611005 (-)
G146257 NA non-coding downstream 158280 19464007 ~ 19464975 (-)
G146227 NA non-coding downstream 403497 19218391 ~ 19219758 (-)
G146189 NA non-coding downstream 537214 19083995 ~ 19086041 (-)
G146023 NA non-coding downstream 1271123 18351867 ~ 18352132 (-)
G146322 NA non-coding upstream 76368 19704004 ~ 19732117 (-)
G146347 NA non-coding upstream 126560 19754196 ~ 19754744 (-)
G146348 NA non-coding upstream 128611 19756247 ~ 19757237 (-)
G146358 NA non-coding upstream 144136 19771772 ~ 19774991 (-)
G146461 NA non-coding upstream 422480 20050116 ~ 20052921 (-)
G146313 NA other downstream 49937 19570059 ~ 19573318 (-)
AMCG00005214 NA other downstream 598794 19013077 ~ 19024461 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other downstream 858957 18741884 ~ 18764298 (-)
AMCG00005158 NA other downstream 2076923 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 3644400 15958704 ~ 15978855 (-)
AMCG00005240 NA other upstream 130596 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 371531 19999167 ~ 20023507 (-)
AMCG00005263 NA other upstream 475990 20103626 ~ 20107827 (-)
G146532 NA other upstream 646755 20274391 ~ 20279746 (-)
AMCG00005270 pik3r3b,LOC107675943,LOC106584012 other upstream 688424 20316060 ~ 20339165 (-)

Expression


Co-expression Network