AMCG00005234


Basic Information

Item Value
gene id AMCG00005234
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19488650 ~ 19492515 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005234
GCACATCTGTTTTGTGGTCTTCCAGCATCACAGAAAGGTTCTCGCCAAGATGAGAGCTGGTTATCTCTTCCTACTTCTGGCACTGCCGTGCGTGTTCTCCAGCAAGGATGGCAAAGCGGAGGAGCTGACCTTCACCGAGGCCCCCCCGGAGACACGGTCGCGCTTCGCCATGCTGGACGACGTTAGGATCTTGGCCAACGGGCTCCTGCAGCTGGGCCACGGGCTGAAAGACTTCGTGCACAAGACCAAGGGGCAGATCAACGATATCTTCCAGAAGCTCAACATCTTCGACCGCTCCTTCTACCAGCTGGAGGTGGTGACCAGCGAGatcagggaggaggaggagcagctgAAGAGGACCACCACCGCGCTGCAGGCCAACAACGAGGAGATCAAGAACATGTCCTTGGAGATCAGCTCCAAAATCAATGGCATCCTGGAGGACCGGACCCTCCTGCAGTCCAAGGTGGGGGGCTTGGAGGAGAAGCTGAGTGGGCTGTCCAAGAGCCTGCCCGAAGCAGGGGACCTGAAGGAGCTCTCATCACTCAAGAGTGTAATTGACACGCAAGAAAGCAGCATTGCGGAGCTCCTGAGAGCGGTCCGGGAGCAACACGACCAGCTGGATCAccagaagaacaaaataaaagaactgGAAGAGAAGCTCAACTATGACACGTTTCAGGAATCGGCCGACAAAGCACCTCCTTTGCAACTCGTCAAACCCCAACCTATAGAGTATCTGCCGAGAGATTCAAATAAAACCCTGGACACCGATGGTCTTCCTATGGACTGCAACGATCTTTACAACAGAGGAGAGAAAGCCAGTGGCGTTTACCCCATCAAGCCCAACCAATCAGAACCCTTTAATGTGTACTGTGAGATGACTCCAGAGGGAGGGTCCGCCGTCATCCAGCGCCGCATGGACGGATCAGTGGATTTTGACCAGACGTGGGAAAAATACGAAAATGGATTTGGAGACCTTGAAAGAGAATTCTGGCTGGGCCTGGAGAAGATCCACGCCCTCGCCCAGCAAGGGGACCACGTCCTGCACATCCAGCTGGAGGACTGGAGGAACGAGAGGCAGTTCATCGAGTACCGCTTCGGGCTGGAGGGCCGGGACTCGGACTACACCATCCACCTGACGCAGCTCTCCGGAGACCTGCCCGATGCCATGACCAACCAGACGGGGATGAGGTTCTCCACCAAAGACCGCGACAATGACAACATGGAGGGATCCAGCTGCGCGGAGAACTACTCCGGAGGATGGTGGTTCAATGCCTGTGGAGACACCAACCTCAACGGCAAGTACATCAAGGTGAGAGCCAAGGGCCGGACTGAGCGCAGGCGGGGGATCTACTGGAAACCAGGCCGAGGGAACCACTACTCCCTCAAGTCCACCAAGATCACCCTCCGCCCCTCTCCTGAAGCCCGGAGCTTttaacccctctctctgtgtcttgcatgtctttatttattcgGGGAGATCTTAACAGTAGTAAGACTCCCATTGCGTTGCATGTGTTATGAATTATGAAGCAGATGAATATTTCTCTGTATATGATAAGCTATGGAGGAGGAGATGCCTTTATGACTCACATCTGCGCATCCACGCAAATGTTTTAAGTTAGGTGTATAggaatatatttgcatttatgtaGGGATGTAGCTTTGAGGTTGTGGATTTTTTTATGTcgaggtttgtttttttaacttatcGCTGTATTTAAACGATTTTTGCTTTCCATGgaatgttcatttaaaaaaaaacgataCATTGAAACACGGAACAGATATGATAATCACGAGAGAAGTGATGCCACAAAAACTACAATTACTTTGATGAATCGCATGTCTTTGTAGGTTACTGAGTCACATTGACTCGAATGACAATTTTCTGCATACaccactgtactgtatatatattttgatatgaaATGTTGCAACGTACATGTTTACAGATGCTTCCACATCACTTAATAAAGTCTATTTATAAAGCTG

Function

GO: NA

KEGG:

id description
K22288 ANGPTL3; angiopoietin-like 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005234 True 1998 mRNA 0.50 7 19488650 19492515

Neighbor

gene id symbol gene type direction distance location
AMCG00005227 NA coding downstream 13207 19466196 ~ 19475443 (-)
AMCG00005222 foxd3,LOC107717135,LOC107591180,LOC107692383 coding downstream 121385 19366141 ~ 19367265 (-)
AMCG00005220 NA coding downstream 128982 19349572 ~ 19359668 (-)
AMCG00005221 NA coding downstream 147941 19332241 ~ 19340709 (-)
AMCG00005219 pgm1,LOC106568718,LOC107731639,LOC107704513,LOC107591179,LOC107739071 coding downstream 158647 19316755 ~ 19330003 (-)
AMCG00005233 NA coding upstream 31297 19523812 ~ 19529682 (-)
AMCG00005228 NA coding upstream 82721 19575236 ~ 19600283 (-)
AMCG00005230 NA coding upstream 130740 19623255 ~ 19627636 (-)
AMCG00005229 NA coding upstream 171586 19664101 ~ 19669052 (-)
AMCG00005241 NA coding upstream 234429 19726944 ~ 19741365 (-)
G146257 NA non-coding downstream 23675 19464007 ~ 19464975 (-)
G146227 NA non-coding downstream 268892 19218391 ~ 19219758 (-)
G146189 NA non-coding downstream 402609 19083995 ~ 19086041 (-)
G146023 NA non-coding downstream 1136518 18351867 ~ 18352132 (-)
G146022 NA non-coding downstream 1190547 18297847 ~ 18298103 (-)
G146315 NA non-coding upstream 118251 19610766 ~ 19611005 (-)
G146322 NA non-coding upstream 211489 19704004 ~ 19732117 (-)
G146347 NA non-coding upstream 261681 19754196 ~ 19754744 (-)
G146348 NA non-coding upstream 263732 19756247 ~ 19757237 (-)
G146358 NA non-coding upstream 279257 19771772 ~ 19774991 (-)
AMCG00005214 NA other downstream 464189 19013077 ~ 19024461 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other downstream 724352 18741884 ~ 18764298 (-)
AMCG00005158 NA other downstream 1942318 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 3509795 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 3953505 15503082 ~ 15535145 (-)
G146313 NA other upstream 77544 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 265717 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 506652 19999167 ~ 20023507 (-)
AMCG00005263 NA other upstream 611111 20103626 ~ 20107827 (-)
G146532 NA other upstream 781876 20274391 ~ 20279746 (-)

Expression


Co-expression Network