AMCG00005241


Basic Information

Item Value
gene id AMCG00005241
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19726944 ~ 19741365 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005241
ATGTCACGGAAGACAGTTGTTTTTACGGCGGAGGAGGTTTTGCCAGAGCTGGAAGGGGAGACAGACCGAGTCCAGCGCTGGCGAGGTAAAGGATTCATGCCCAGTGTTCAGCCAATCAGGTACAGCTGTTCTATGGCACATGGCGGCAGGAGACCTTTCCAATGGGTGGAGACGTTCAGCCACAAGCCGGTGGACTTCAAGGGCATGGCAATGATTGCACAGCTGGAGCAGAGTGGACTGGGGCCCGGGGTCCCTCATGGGAGCCTAGCTGGATATCAGCCCTGGACACTGGGAATAAAAGGATCACATGAGAAATTGCAGCAGGCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005241 True 330 mRNA 0.56 3 19726944 19741365

Neighbor

gene id symbol gene type direction distance location
AMCG00005229 NA coding downstream 57892 19664101 ~ 19669052 (-)
AMCG00005230 NA coding downstream 99308 19623255 ~ 19627636 (-)
AMCG00005228 NA coding downstream 126661 19575236 ~ 19600283 (-)
AMCG00005233 NA coding downstream 197262 19523812 ~ 19529682 (-)
AMCG00005234 NA coding downstream 234429 19488650 ~ 19492515 (-)
AMCG00005250 LOC103463064,LOC103355575,LOC104919037,LOC103137203,LOC101157045 coding upstream 43509 19784874 ~ 19799356 (-)
AMCG00005249 NA coding upstream 58369 19799734 ~ 19805056 (-)
AMCG00005251 orc1 coding upstream 105426 19846791 ~ 19855209 (-)
AMCG00005252 NA coding upstream 116493 19857858 ~ 19878152 (-)
AMCG00005243 LOC107737066,LOC107384472 coding upstream 165721 19907086 ~ 19916367 (-)
G146315 NA non-coding downstream 115939 19610766 ~ 19611005 (-)
G146257 NA non-coding downstream 261969 19464007 ~ 19464975 (-)
G146227 NA non-coding downstream 507186 19218391 ~ 19219758 (-)
G146189 NA non-coding downstream 640903 19083995 ~ 19086041 (-)
G146023 NA non-coding downstream 1374812 18351867 ~ 18352132 (-)
G146347 NA non-coding upstream 12831 19754196 ~ 19754744 (-)
G146348 NA non-coding upstream 14882 19756247 ~ 19757237 (-)
G146358 NA non-coding upstream 30407 19771772 ~ 19774991 (-)
G146461 NA non-coding upstream 308751 20050116 ~ 20052921 (-)
G146469 NA non-coding upstream 321184 20062549 ~ 20063413 (-)
G146313 NA other downstream 153626 19570059 ~ 19573318 (-)
AMCG00005214 NA other downstream 702483 19013077 ~ 19024461 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other downstream 962646 18741884 ~ 18764298 (-)
AMCG00005158 NA other downstream 2180612 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 3748089 15958704 ~ 15978855 (-)
AMCG00005240 NA other upstream 16867 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 257802 19999167 ~ 20023507 (-)
AMCG00005263 NA other upstream 362261 20103626 ~ 20107827 (-)
G146532 NA other upstream 533026 20274391 ~ 20279746 (-)
AMCG00005270 pik3r3b,LOC107675943,LOC106584012 other upstream 574695 20316060 ~ 20339165 (-)

Expression


Co-expression Network