AMCG00005244


Basic Information

Item Value
gene id AMCG00005244
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19935353 ~ 19953666 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005244
ATGGCCGTGGCGCTGGACGCGGTGTGGGTGCGGGTGAAGGATGTGTGCAAGAGGAATGGGCTGCTGATCCTCTCTGTGCTCTCCGTCATCATCGGCTGCCTCCTGGGCTTCTTCCTACGGACGCGGCGGCTCTCCGAGCAGCAGGAAGCCCAGCACAACACAGTGGCACTGAGACTCAAACTGTGTCAATACAGGCCGCGGTGGCCCGGAGCCTCTGGGCACGTGAGACCAGTAGACTGGGCAGCTGGCAGGCGACCATCCTGTCAGGATGAGGCGGTGAACAGGGCTCCCCTGTCATCCTGGCACATCGAGCATCTCTCACAGGGCAGCAGCTGGGCAGGGCTGGATACGGGACTGTGGCACTCGAACGCATCTGACTCCACACAGGCTAAAGCAGTGACTGGAGGCAGGGGGCAAGAAAGCAAGTCTCGTGCTTTCTTCCATCACAAGCAGCAGTCCTCACTGGAGAATATTATTAACCTGTTTACAACCCCCCAGACAGTAGGCATTGAAACATGGTCCCAAATGCTGGCTGGGCTGCAGCAGGTGACCGCAGGCATGGAAAGCTGGCAGGATACGAAGGAGGGGTTACTGCAGCAGACAGGGACGGAGGTCAAATATTTCCAGTTCCCTGGAGAGCTGCTAATGAGGATGTTGAAAATGCTCATTCTTCCACTTGTCGTTTCCAGGGAAAAGGAGAGTAACTCAGGCCAGCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005244 True 720 mRNA 0.57 5 19935353 19953666

Neighbor

gene id symbol gene type direction distance location
AMCG00005247 gpx7 coding upstream 50802 19879542 ~ 19884551 (+)
AMCG00005245 prpf38a,LOC107731643,LOC107684051,LOC107725199 coding upstream 76739 19855589 ~ 19858614 (+)
AMCG00005248 NA coding upstream 90037 19837762 ~ 19845316 (+)
AMCG00005246 NA coding upstream 98867 19816840 ~ 19836486 (+)
AMCG00005236 NA coding upstream 151749 19775479 ~ 19783604 (+)
AMCG00005242 slc1a7,LOC106600499,LOC105022788,LOC105925312 coding downstream 14013 19967679 ~ 19977076 (+)
AMCG00005254 NA coding downstream 62272 20015938 ~ 20019521 (+)
AMCG00005253 tmco1 coding downstream 93717 20047383 ~ 20051117 (+)
AMCG00005255 aldh9a1a.1,LOC102301203,LOC106676834 coding downstream 98283 20051949 ~ 20063397 (+)
AMCG00005262 akr1a1,akr1a1b,LOC107725198 coding downstream 175563 20129229 ~ 20139948 (+)
G146350 NA non-coding upstream 174562 19760152 ~ 19760791 (+)
G146307 NA non-coding upstream 342259 19592750 ~ 19593094 (+)
G146306 NA non-coding upstream 349697 19585448 ~ 19585656 (+)
G146304 NA non-coding upstream 359779 19573323 ~ 19575574 (+)
G146303 NA non-coding upstream 365350 19569473 ~ 19570003 (+)
G146442 NA non-coding downstream 53750 20007416 ~ 20011135 (+)
G146450 NA non-coding downstream 70507 20024173 ~ 20026061 (+)
G146486 NA non-coding downstream 154436 20108102 ~ 20109541 (+)
G146544 NA non-coding downstream 362341 20316007 ~ 20333122 (+)
G146590 NA non-coding downstream 688602 20642268 ~ 20655773 (+)
G146305 NA other upstream 355546 19579573 ~ 19579807 (+)
AMCG00005232 dock7 other upstream 404900 19475139 ~ 19530453 (+)
AMCG00005199 wdr78 other upstream 1113711 18815029 ~ 18821642 (+)
G145932 NA other upstream 2163828 17765257 ~ 17771525 (+)
AMCG00005105 LOC102220226,LOC108442892 other upstream 4550542 15379599 ~ 15384811 (+)
G146519 NA other downstream 228688 20182354 ~ 20184643 (+)
AMCG00005272 mast2 other downstream 299343 20253009 ~ 20279786 (+)
G146575 LOC103468264,LOC108238356,LOC106512499 other downstream 567983 20521649 ~ 20524819 (+)
G146596 NA other downstream 708260 20661926 ~ 20670169 (+)
AMCG00005286 NA other downstream 745820 20699486 ~ 20702472 (+)

Expression


Co-expression Network