AMCG00005275


Basic Information

Item Value
gene id AMCG00005275
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 20542102 ~ 20547367 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005275
ATGTTCTTATGCAACACCAGTGCCATCAAAGACTGGAGCTATTTCCTTTCCCAGCTGTTGCCGCTTGTCAACAAAACGGCCGGGTTGGTTCACCGGGGCATCGAGAACATAGAGGCCACCACCATCCCCGTGGTCGCCGTGCTGGAGCCCGACCTCAGCGGGATGAGCGCCCACAGCCCCCCGCTGAACTCCAGCAACCACACCACGGGCCTGGAGCACCTGTTCCAGTACTCGTACTCGGAGAATGAGCTGCTCTACACGGACTACAAGCCCCCGGCCCGGGACGCCATCCCGCTGCCCAAAGCCGTGCTGTATTTGGTCATGGCGGccctggtggtggtggtggtggcctATGCCATCGTTGGTCACCTAATCAAGGACCTGGTCCACGACTTAGTTGATTGGATGTTTGGCCCGGGTCCCGAGGACCACAGCAACAAGAGCGACATCAACTGCATCTCCAACAACACGGACGAGATGGCCGAGACGGGGGGCCAGTCCGTGCCGCAGGAGATGAACCACGTCGGCGAGAATTACTGCTTGACCCCGATCAAGCCGGACGACCTCATCGTCACCATCGACGAGACGGAGCCGCCGCCCCGGGAGGCGCACAGCGGCACTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005275 True 624 mRNA 0.61 2 20542102 20547367

Neighbor

gene id symbol gene type direction distance location
AMCG00005277 LOC103468264,LOC108238356,LOC106512499 coding downstream 16801 20524046 ~ 20525301 (-)
AMCG00005271 NA coding downstream 150541 20370668 ~ 20391561 (-)
AMCG00005266 NA coding downstream 355665 20182380 ~ 20186437 (-)
AMCG00005265 ipp coding downstream 361123 20175497 ~ 20180979 (-)
AMCG00005267 LOC106560440 coding downstream 368045 20163351 ~ 20174057 (-)
AMCG00005294 NA coding upstream 92291 20639658 ~ 20643224 (-)
AMCG00005295 NA coding upstream 100189 20647556 ~ 20677947 (-)
AMCG00005293 NA coding upstream 161419 20708786 ~ 20709969 (-)
AMCG00005291 NA coding upstream 176511 20723878 ~ 20735082 (-)
AMCG00005296 NA coding upstream 199073 20746440 ~ 20751899 (-)
G146578 NA non-coding downstream 6902 20534368 ~ 20535200 (-)
G146576 NA non-coding downstream 18284 20521649 ~ 20523818 (-)
G146503 NA non-coding downstream 394748 20146085 ~ 20147354 (-)
G146487 NA non-coding downstream 432572 20108125 ~ 20109530 (-)
G146469 NA non-coding downstream 478689 20062549 ~ 20063413 (-)
G146607 NA non-coding upstream 51872 20599239 ~ 20599503 (-)
G146609 NA non-coding upstream 52807 20600174 ~ 20600514 (-)
G146623 NA non-coding upstream 86757 20634124 ~ 20636209 (-)
G146631 NA non-coding upstream 147448 20694815 ~ 20707606 (-)
G146652 NA non-coding upstream 209589 20756956 ~ 20757321 (-)
AMCG00005276 pomgnt1 other downstream 39896 20491051 ~ 20502206 (-)
AMCG00005270 pik3r3b,LOC107675943,LOC106584012 other downstream 202937 20316060 ~ 20339165 (-)
G146532 NA other downstream 262356 20274391 ~ 20279746 (-)
AMCG00005263 NA other downstream 434275 20103626 ~ 20107827 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other downstream 518595 19999167 ~ 20023507 (-)
G146618 NA other upstream 61987 20609354 ~ 20610643 (-)
AMCG00005333 NA other upstream 938582 21485949 ~ 21487711 (-)
G146938 NA other upstream 1197509 21744876 ~ 21745453 (-)
AMCG00005343 NA other upstream 1198177 21745544 ~ 21747798 (-)
AMCG00005363 NA other upstream 1423668 21971035 ~ 21982521 (-)

Expression


Co-expression Network