AMCG00005288


Basic Information

Item Value
gene id AMCG00005288
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 20763632 ~ 20768980 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005288
ATGAGCCTGTTTGAGAAGCGCGTCAGGAGAGACGCCCCCCGGCTGCAGGAGAGACGCCCCCCGGCTGGAGGAGAGACGCCCCCCGGCTGGAGGAGAGACGCCCCCCGGTCCGGTGCGCATCCAGCTGATGGCGGAGAAGAAGTTCACAGGAGCCCCGTTCGGCTCGCAGTCGGCCAGGAGAGGAGGCTGGGTCCCGGCACCTACGATGTCCAGACCGGGGACTTCAGCCCTCGAGCGGTGTCTGAACGGGCGAGGGGCCCAGGGTGGAAGAGGGCCCAGGAGACCGCCCGGCTGGCACAGACGCCCCACCTGCTGTGCAAAGACATCTGGGAGAACAAGCGCTTCCTGAAGTCCAAAGTGGGCCCGGGGAGCTACAGGGTCAGCGACTTCATCGAGCTGCTGGAGAAGAGGCCAGGGAGTGTGAGGGGCGTGTGCGAGGCCCGGGAGGAGCGCTTCCGACAGCAGCGGCAGGTACACGGCCACACACTGGCCCACGCAGCGGCAGGCACTAGCTATGCTCTTGGGCCGGGCTCCTACGGCAAAGGTGGCATTCCCTGGGCGGCGCTGGAGGAGAAGAGGAACCAGTCGGCCGGGACCTGTCCATCCATGGACTTCGATTCCAGGAAGGAGCGATTTCAGCAGCGCACAGTGggcaGTGACTTAGGCCCCGGCACCTACAACCTGAAGACGTCCACCGAGCTGCTCCTCGGCAAGAGCGTCAGCAAGCGGGGGCCtttgttttctgtcccCAAGAAACGGGTCGACCTGCAGCCGGGCCAGTACAGTAACCCGGTGCTGACGTTCGTGGACGAGCtggagaagaaggagaggaggaagcaGGGTGTGTTCAGCACGCTGGCGCAGTACCCGGCAATCCCCACGGAGAGGTTTTGCCACAGCTCCCTGTCTCGGTGTCCTCACCCCGTGgcattCCCCGGCCCAGGCTGGTATGACCCCCACCCCATAACCCGAGCCGAGAACCACCGGAACCCCCCCTTCCTGTCCTCGGCCCCGCGCTCCAGCGCCAGGGCAGAGCGGCTGCAGAACGGCAGCCACAACCCTGTGGGCCCTGGACGCTATGACATCAGCAGCCACAGCAGGACGCCGCGCACCTATCACTCGGCCTTCGGCTCCCGGACGCAGCGCTATCTGAGCAACCTGGACCGGGACAAGCACTGCCAGGAGAGACTGCGCCCCATCAACGTCCCAGTGGACAGGAGGTCCTCCCTGCTGCCCCCAGAGAAGCCCCTCGGAGCCGCCACCCTACGCACAGCTGCAGTGGCCTAGCAGCCCTCGAACACAGACCCTGCGCTGATACTGCGATATTCCTCAAAGCAGACTTAAATTCATGTTGAAAAACTAacttttgtatgtgtgtgtttagccatgtatgtatgtatgttttcaccTGGCTGCTTGATACACATGACAGCTGGCAGGGATGGATACTGATTTATGTTgatacacacacttatatagacatgcacacacacacacacacacacacacacctgtccagctctcattttgatttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005288 True 1536 mRNA 0.62 9 20763632 20768980

Neighbor

gene id symbol gene type direction distance location
AMCG00005287 si:ch211-121a2.4,LOC107687197,LOC107581514,LOC103033168,LOC108416079,LOC107712847 coding upstream 21331 20741178 ~ 20742301 (+)
AMCG00005279 NA coding upstream 135701 20597743 ~ 20627931 (+)
AMCG00005278 NA coding upstream 167878 20589746 ~ 20595754 (+)
AMCG00005274 NA coding upstream 273968 20484932 ~ 20489664 (+)
AMCG00005273 mast2 coding upstream 554175 20208791 ~ 20209457 (+)
AMCG00005282 NA coding downstream 12328 20781308 ~ 20794020 (+)
AMCG00005281 NA coding downstream 34641 20803621 ~ 20806381 (+)
AMCG00005283 NA coding downstream 38221 20807201 ~ 20814750 (+)
AMCG00005284 bloc1s2,LOC107581516,LOC107697361,LOC107712883 coding downstream 81924 20850904 ~ 20854030 (+)
AMCG00005302 prkaa2 coding downstream 253224 21022204 ~ 21031993 (+)
G146640 NA non-coding upstream 12694 20750304 ~ 20750938 (+)
G146599 NA non-coding upstream 25311 20682625 ~ 20738321 (+)
G146591 NA non-coding upstream 51412 20642772 ~ 20712220 (+)
G146590 NA non-coding upstream 107859 20642268 ~ 20655773 (+)
G146544 NA non-coding upstream 430510 20316007 ~ 20333122 (+)
G146701 NA non-coding downstream 86731 20855711 ~ 20855918 (+)
G146703 NA non-coding downstream 98226 20867206 ~ 20867406 (+)
G146749 NA non-coding downstream 294993 21063973 ~ 21064908 (+)
G146782 NA non-coding downstream 557552 21326532 ~ 21328902 (+)
G146815 NA non-coding downstream 629696 21398676 ~ 21398971 (+)
AMCG00005286 NA other upstream 61160 20699486 ~ 20702472 (+)
G146596 NA other upstream 93463 20661926 ~ 20670169 (+)
G146575 LOC103468264,LOC108238356,LOC106512499 other upstream 238813 20521649 ~ 20524819 (+)
AMCG00005272 mast2 other upstream 483846 20253009 ~ 20279786 (+)
G146519 NA other upstream 578989 20182354 ~ 20184643 (+)
AMCG00005280 NA other downstream 28478 20797458 ~ 20803197 (+)
G146790 NA other downstream 568452 21337432 ~ 21340712 (+)
AMCG00005329 ipo13,LOC103463745,LOC105910849 other downstream 797658 21566638 ~ 21572321 (+)
AMCG00005340 ralgps2,LOC106531732 other downstream 911728 21680708 ~ 21704518 (+)
G146952 NA other downstream 1042752 21811732 ~ 21848136 (+)

Expression


Co-expression Network