AMCG00005309


Basic Information

Item Value
gene id AMCG00005309
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21327357 ~ 21329990 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005309
ATGACACGGGACACCTCCTCGCTGCGCTTCCGGGTTCCGCACACGTCACCCGCTGCTGACGTCCGGCGCAGAGGCCGCGCAGCCGACATGGCCCGCAACGAGGAGAAGCAGCTGGGGAAGCTCAACCGGCTGtggctgcagagagagagagacgTCGTGTTTGAATTCAGCCCCAGCGGTGAAGAAGTGGATTCCCAGCATCAAGAACGAGATCGACAGTCCCAGCTGTCTCACTACCCCGAGCGCAAGATCGCCGAGTTCCAGCGGCACGTCGAGGACCTGGGCCAGGAGTACAAGCGGTTCCTGCGCAAACTCCGGGCCCTGGACCCGTCCTGCAGGCACCAGCCCTGGACCCTGCGCGGCTACAGCAAGAGGCGGCGGCTCACGGACGGGTCGGGGTGTCGGAGCCAGACGGAGTGCGAAGGCGTAAAGACGCTCCTCACTCCCATCCTGTCCGAGTCTGCGGAGCCGGCGGGTGAAGAGTCCGACAGCGAGACGGACCTGGACGGCACCGTGGCCGGGGACCCGCCTCCAGAGGTCTctccggcccggcccggcccggacCCGGCCCCGGATCTGCCCGGCCAGGACCGGCCCCTGTCCTTCGATCTCCGCAAGATGCCGCTGAAATTCACGGGGCGCCCGGCCGGGCCTGGGGAGGAGAACGCGGACAGCCTGGCCAGGGTCCTGTTTCTGGGGCTCCCGAACCTGCGCGGCTCCTCTGCGGCCCGGGCGGTCGAAACGCACAACGCCCCGCCCGGAGAGAAGGAAGGATCTGATCCGAGCGCCGCCAGACCCCCGACAGAACCCAGGCCACACGTGCTGGGTCTGGACTGCTACTCCTCCTCAGAAGACGACGCATAAGCTGCTCTCGCACGGGACGGTGGAACCCGGGGCGAAAATGGAGATAGTGTCGTGTGAAAACGGCTGTATTGTGCtgctgtggggggggcggggatTTATTGGTGGTCTGTACGTATTAGTTGAGCACGGCTTCACATACACTTCGCTTTACTTCTTGTGGAAGCAGTTTTATGGGTGATTTGATAGTTTTTTGTAGAACTTGTCGTTGCCCTCCTTATGCCTGGATTCCCATCCCACTGGGGTCACCCCTGGGGATAGACTGGGGTTCGGGGGTGGCAGCCAGATCAGACTGGTCTAGAGGGATGTTTCTCCCCCGTGTTGTTCTGGGATGTGACTCTTGGGAGAACCTGTATCCTATTCTAGTCTTGTATCCGGTCCCTCTTTTGGTTGTAGACAGATGACAATAAAACGCTCTGGTAGTCTACTTTGTGCGGTGGTTCATTTTAAGAAGTTGAAATACTATTCTGGATGGCTTATTCTGTAAAAATAGAGATAAATGACAGACTGGGAGATAAATCCACTTGTACAATTATTCAGGTGATTACAGAGTCAGTTACTGGTAAATATAACTCTGTGATATTTATACCGAAGCTGAGGTTCGCTCTGCTTGTAATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005309 True 1481 mRNA 0.59 4 21327357 21329990

Neighbor

gene id symbol gene type direction distance location
AMCG00005307 NA coding downstream 1262 21317619 ~ 21326095 (-)
AMCG00005308 NA coding downstream 10372 21310065 ~ 21316985 (-)
AMCG00005298 dab1a,LOC107716552,LOC107712876,LOC107581465 coding downstream 212502 21111735 ~ 21114855 (-)
AMCG00005301 NA coding downstream 228288 21098565 ~ 21099069 (-)
AMCG00005300 NA coding downstream 232213 21086585 ~ 21095144 (-)
AMCG00005306 NA coding upstream 1258 21331248 ~ 21333536 (-)
AMCG00005310 NA coding upstream 8255 21338245 ~ 21339228 (-)
AMCG00005312 NA coding upstream 127418 21457408 ~ 21462473 (-)
AMCG00005331 NA coding upstream 174175 21504165 ~ 21521031 (-)
AMCG00005332 NA coding upstream 216445 21546435 ~ 21548854 (-)
G146702 NA non-coding downstream 469555 20857600 ~ 20857802 (-)
G146652 NA non-coding downstream 570036 20756956 ~ 20757321 (-)
G146631 NA non-coding downstream 619751 20694815 ~ 20707606 (-)
G146623 NA non-coding downstream 691148 20634124 ~ 20636209 (-)
G146609 NA non-coding downstream 726843 20600174 ~ 20600514 (-)
G146813 NA non-coding upstream 51316 21381306 ~ 21381569 (-)
G146857 NA non-coding upstream 230059 21560049 ~ 21561461 (-)
G146891 NA non-coding upstream 260006 21589996 ~ 21606535 (-)
G146951 NA non-coding upstream 476990 21806980 ~ 21807306 (-)
G147122 NA non-coding upstream 802276 22132266 ~ 22180932 (-)
G146618 NA other downstream 716714 20609354 ~ 20610643 (-)
AMCG00005276 pomgnt1 other downstream 825151 20491051 ~ 20502206 (-)
AMCG00005270 pik3r3b,LOC107675943,LOC106584012 other downstream 988192 20316060 ~ 20339165 (-)
G146532 NA other downstream 1047611 20274391 ~ 20279746 (-)
AMCG00005263 NA other downstream 1219530 20103626 ~ 20107827 (-)
AMCG00005333 NA other upstream 155959 21485949 ~ 21487711 (-)
G146938 NA other upstream 414886 21744876 ~ 21745453 (-)
AMCG00005343 NA other upstream 415554 21745544 ~ 21747798 (-)
AMCG00005363 NA other upstream 641045 21971035 ~ 21982521 (-)
AMCG00005362 rgl1,LOC107657943,LOC107750730,LOC107717560 other upstream 700835 22030825 ~ 22054967 (-)

Expression


Co-expression Network