AMCG00005312


Basic Information

Item Value
gene id AMCG00005312
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21457408 ~ 21462473 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005312
ATGGGGATCTGGCTGATGATTAACAGGCTGTCAGATGTATTGTCCACGGTGATGCCATCACTCCACATTTCCTGGTCAACTCTTCTCAGAAGCAGCTGCCGTCTCGACACCTCCGACTCGACGCACAGCCATGCACGCCAGCTGCTCACGGTCAAGCCCAAGGTCGGAGAGCAGCGGGGTTCAAAGTCACACCTGCCACGGGACGGGCccacggagagagagacacggcTTTCCACACGCGAGCCACAAGGACAGACAGAGCCGCCCCAGTGCCCACAGAGACTGGCACTGCCCGCTCCCTGTCTGATCGCCTACTGGAGACACGGCTCCTGGCTCGGCGCGATCAGCTGCCCTCTCTGCAGGCAAAAGGTCAGCGTGCTGCATCACCTGTTCACTGAGTCCATCGCTGACCGGCAGGAGCGCCAGGTGCTGCTGGACATCCACGACTACAACAAGCGCTTCTCTGGAGCTCCGCGCCCGGTGGCAGACTATCTGTACGACATGCCCACGTTCCTGCACCTGGCGCTCCGTGGTCTCTGCACCATGGGCGGCCTGGTGTGGGTGTTCTTCCTGCGGGTGGCGGTGTGCTGCTTCGGCGCCGTCATGTCACTTGCCTCCCCGCTGGACTCCATCCCCGAGCCCTTCTGCGGTGTGCTGGGGGCCCTGGACGACCTGGTGGTGGTCTTCCTGCTGCTCATCTGCGTTGTCAACATCAACCAGCAGATTGGCCCGGATAGCGGCACCCTCCCGCCCGGTGCCACACAGCAGGGTGTGCTCTCCGACGCCCTGTAACGCAGGGACAATGCGGGGGACAATGTCTGGACCTGTGTGGGGCACTGGGGGAGGGATGGCCTGGGAGGGATGTCCACCTCCAGACATGGATGTCCATGTCTCAAGACAGGAActcagaaaggaagaaaaagagaacaGTTGGGCAGTTGACGTATAAAAACTCAAGAACGGTGCCATGAGAAGAAAGACCCATTTATTTTCCCGCATCTTGCTGGGTTGGTAGTGTCTGGACCCAAGAACGTCATAAAACTGCTttgttgaaggaaaaaaactgtgAACATCCCACGGTTAGGTACTTTCCGATTGTTCTTTCTCCCAATCGTCTCCAGGACTGTAGGAGAGACATGGAATGGATGGGGGGATTGAAGAGATGTCATTTCCAGTGCTGCCCGTCCGCACCGGCAGTGGTCCCGTCACTTGGTCATGCAGGTGTGTCACCCCACTACATGACACGGCAGGCTCGTGAAATGCTTACCACTTTAAAAGACCCTAAACTCGACAGACGTGTATGTTTCAGTTGAGCCTCCAGTTTCATGTCGAGGCAGCAACGCAGCATCCTCAAGAACAATCGAAGGTGAACATAATagcaacaacaatgacaatagTAATACAGAagtgcaatatttaaaaaaaaaaaaaaaaaaaaa

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005312 True 1439 mRNA 0.56 6 21457408 21462473

Neighbor

gene id symbol gene type direction distance location
AMCG00005310 NA coding downstream 118180 21338245 ~ 21339228 (-)
AMCG00005306 NA coding downstream 123872 21331248 ~ 21333536 (-)
AMCG00005309 NA coding downstream 127418 21327357 ~ 21329990 (-)
AMCG00005307 NA coding downstream 131313 21317619 ~ 21326095 (-)
AMCG00005308 NA coding downstream 140423 21310065 ~ 21316985 (-)
AMCG00005331 NA coding upstream 41692 21504165 ~ 21521031 (-)
AMCG00005332 NA coding upstream 83962 21546435 ~ 21548854 (-)
AMCG00005334 NA coding upstream 86384 21548857 ~ 21551959 (-)
AMCG00005330 LOC108238293 coding upstream 110155 21572628 ~ 21580706 (-)
AMCG00005324 LOC103461122 coding upstream 131553 21594026 ~ 21605919 (-)
G146813 NA non-coding downstream 75839 21381306 ~ 21381569 (-)
G146702 NA non-coding downstream 599606 20857600 ~ 20857802 (-)
G146652 NA non-coding downstream 700087 20756956 ~ 20757321 (-)
G146631 NA non-coding downstream 749802 20694815 ~ 20707606 (-)
G146623 NA non-coding downstream 821199 20634124 ~ 20636209 (-)
G146857 NA non-coding upstream 97576 21560049 ~ 21561461 (-)
G146891 NA non-coding upstream 127523 21589996 ~ 21606535 (-)
G146951 NA non-coding upstream 344507 21806980 ~ 21807306 (-)
G147122 NA non-coding upstream 669793 22132266 ~ 22180932 (-)
G147156 NA non-coding upstream 766726 22229199 ~ 22229991 (-)
G146618 NA other downstream 846765 20609354 ~ 20610643 (-)
AMCG00005276 pomgnt1 other downstream 955202 20491051 ~ 20502206 (-)
AMCG00005270 pik3r3b,LOC107675943,LOC106584012 other downstream 1118243 20316060 ~ 20339165 (-)
G146532 NA other downstream 1177662 20274391 ~ 20279746 (-)
AMCG00005263 NA other downstream 1349581 20103626 ~ 20107827 (-)
AMCG00005333 NA other upstream 23476 21485949 ~ 21487711 (-)
G146938 NA other upstream 282403 21744876 ~ 21745453 (-)
AMCG00005343 NA other upstream 283071 21745544 ~ 21747798 (-)
AMCG00005363 NA other upstream 508562 21971035 ~ 21982521 (-)
AMCG00005362 rgl1,LOC107657943,LOC107750730,LOC107717560 other upstream 568352 22030825 ~ 22054967 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location