AMCG00005314


Basic Information

Item Value
gene id AMCG00005314
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21622078 ~ 21624606 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005314
GCGCAGCACTGCGGGGCACATAGCGCCACCGCCCAGCTTCGGCCGTGTGAGCGGCGTCCTTACAGCCCAGGTCGGACACTGTCCTTGAGCGGACAGCCGGGCTCCTCGGCTCGGCTCGGTTCGGCTCGGGTCAGGTCGGGTCGGGTCGGGGGACACCGAGCGCATTGCCAGCTCTTGTTTCCGGGGGGACCCCCTCACTGCTGCACAGCCTGCCGGTCGAGCCGCGGATAGAGGACACGCTGATTGTGCAAGTGCGCGTATTTACTCCGGCTTGTATTACTTtgtttgtatgatttaaaacaataggAACATGTCATTGTTCTCAGAATGCGCGTGTCGTTCTCACGCAGTATGACGTACATCAGTCTAGACGACAGGGGCATTTCCCCACACGAACCCCGACGCGGCTGCATGGCGCTCATCgtgcagTCGTGATGGTGGTGCTATCAAAGGAGTTTGGTTATGTGGTTCTGACGGGCGCCGCCAGCTTCGTCATGGTCGCCCACCTGACCATCAACGTTGGCAAAGCCCGCAAGAAGTACCATGTGGAATACCCTCAGATGTACAGCGACGACCCGGAGAACGGCAAGATCTTCAACTGCATCCAGCGCGCTCACCAGAACACCCTGGAGTCCTACCCTGCGTTCCTGTTCTTCCTGGTCATGGCGGGCATTCATAGCCCACGTGCGGCCAGCGCACTGGGGCTGACCTGGACCGTGGGCCGGGAGGTGTTCGCGCATGGATACTCCACTGGAGACCCCGAGAAGCGTAGGTTTGGGCTGTTCGGGAACCTGGCGCTGTTGGGGCTGGTGGGTCTGTCGGTGGACTTCGGCAGAACCCTGCTGGGCTGGGGGGTCAAGCACTGCTGTCACTGAGCCCCCCCCACTGAGCGAGAGATGTACTACACCGAGCTGCTGCCTGCTTGATTGCTTATCTGAGCCGTGCAGAAGTCAATCGAGTAATTAAGGAGTTGGTGAGGGGTCCAGCTGGAGAAGACGGTCGTCCCTCTTCCCCCCCATgctccctcccttctcttctcTGTCCTGCGTCTCTGAAGGGCAGCTCCTGTCTGCGGCTCAGACCCGCGTCTCGCTCAGCAGGGACACCAGCTCTGTCACTTGTCAACAACTTTACTTGGAATAAAAACTGTCAATTAAAA

Function

GO: NA

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005314 True 1159 mRNA 0.59 6 21622078 21624606

Neighbor

gene id symbol gene type direction distance location
AMCG00005313 NA coding upstream 3897 21606202 ~ 21618181 (+)
AMCG00005328 ipo13,LOC107573327,LOC105910849,LOC107719407 coding upstream 32395 21583176 ~ 21589683 (+)
AMCG00005327 NA coding upstream 81173 21529222 ~ 21540905 (+)
AMCG00005326 NA coding upstream 112466 21499408 ~ 21509612 (+)
AMCG00005325 hook1,LOC106613947,LOC107737379 coding upstream 142862 21465568 ~ 21479216 (+)
AMCG00005315 NA coding downstream 6374 21630980 ~ 21635167 (+)
AMCG00005316 LOC107721804,LOC107712838,LOC105910841,LOC107597850,LOC101160230,LOC107581484 coding downstream 16785 21641391 ~ 21652788 (+)
AMCG00005317 NA coding downstream 37743 21662349 ~ 21666890 (+)
AMCG00005322 NA coding downstream 52981 21677587 ~ 21679103 (+)
AMCG00005339 ralgps2,LOC107581502,LOC107712857 coding downstream 82736 21707342 ~ 21708394 (+)
G146815 NA non-coding upstream 223107 21398676 ~ 21398971 (+)
G146782 NA non-coding upstream 293176 21326532 ~ 21328902 (+)
G146749 NA non-coding upstream 557170 21063973 ~ 21064908 (+)
G146703 NA non-coding upstream 754672 20867206 ~ 20867406 (+)
G146701 NA non-coding upstream 766160 20855711 ~ 20855918 (+)
G146915 NA non-coding downstream 85751 21710357 ~ 21712783 (+)
G146928 NA non-coding downstream 120273 21744879 ~ 21745451 (+)
G147022 NA non-coding downstream 323480 21948086 ~ 21948618 (+)
G147024 NA non-coding downstream 325722 21950328 ~ 21950587 (+)
G147027 NA non-coding downstream 331995 21956601 ~ 21957045 (+)
AMCG00005329 ipo13,LOC103463745,LOC105910849 other upstream 49757 21566638 ~ 21572321 (+)
G146790 NA other upstream 281366 21337432 ~ 21340712 (+)
AMCG00005280 NA other upstream 818881 20797458 ~ 20803197 (+)
AMCG00005286 NA other upstream 919606 20699486 ~ 20702472 (+)
G146596 NA other upstream 951909 20661926 ~ 20670169 (+)
AMCG00005340 ralgps2,LOC106531732 other downstream 56102 21680708 ~ 21704518 (+)
G146952 NA other downstream 187126 21811732 ~ 21848136 (+)
AMCG00005345 NA other downstream 258593 21883199 ~ 21887568 (+)
G147021 NA other downstream 320952 21945558 ~ 21947991 (+)
G147025 NA other downstream 327963 21952569 ~ 21952882 (+)

Expression


Co-expression Network