AMCG00005315


Basic Information

Item Value
gene id AMCG00005315
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21630980 ~ 21635167 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005315
ATGGAGCACTCCGGCCCCCATGGTGCACTGCGGCTGCGCTTCGAGGGCGTCATGGCGGAGGCTGGACTGGACGCGGGCAGCGCGGAGCGGGCGCTCAGTGCGGCTCTGTCTCCGCGGGGCTTCGAGGTGTATCCTCTGCAGGTGGGCTGGTACAATGCGCTGCTGGCGCCGGCGCTGCGTCTGGCCCACAGTGACGAGACGCTGGCACTGGTGGTGCTCAGCACGCCCACCATGTTCGAGAATGCCTTCCTGCCCTTCCTACAAAATGAGCGCCGGTCCGGAAACTGTGACCTCATCGACCAGTGTGTGGCGCACTACATCAGCGGCGCTGTGGCACAGTGCTTCCCTGGGCAGCAGGTAGAGATCAGCTATGACTATGAGATGCTGCCGAACCGCAGGCCTCGCTTCCTGGCCCAGACTGCGGCCCACGTGGCTGGAGCCACCTACTACTACCAGCTCAGCGACGTCCCCGACCCGCCCTGGGACCGG

Function

GO: NA

KEGG:

id description
K14618 MMACHC; cyanocobalamin reductase (cyanide-eliminating) / alkylcobalamin dealkylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005315 True 489 mRNA 0.66 3 21630980 21635167

Neighbor

gene id symbol gene type direction distance location
AMCG00005314 NA coding upstream 6374 21622078 ~ 21624606 (+)
AMCG00005313 NA coding upstream 12799 21606202 ~ 21618181 (+)
AMCG00005328 ipo13,LOC107573327,LOC105910849,LOC107719407 coding upstream 41297 21583176 ~ 21589683 (+)
AMCG00005327 NA coding upstream 90075 21529222 ~ 21540905 (+)
AMCG00005326 NA coding upstream 121368 21499408 ~ 21509612 (+)
AMCG00005316 LOC107721804,LOC107712838,LOC105910841,LOC107597850,LOC101160230,LOC107581484 coding downstream 6224 21641391 ~ 21652788 (+)
AMCG00005317 NA coding downstream 27182 21662349 ~ 21666890 (+)
AMCG00005322 NA coding downstream 42420 21677587 ~ 21679103 (+)
AMCG00005339 ralgps2,LOC107581502,LOC107712857 coding downstream 72175 21707342 ~ 21708394 (+)
AMCG00005336 LOC106584283,LOC106613957 coding downstream 87413 21722580 ~ 21727870 (+)
G146815 NA non-coding upstream 232009 21398676 ~ 21398971 (+)
G146782 NA non-coding upstream 302078 21326532 ~ 21328902 (+)
G146749 NA non-coding upstream 566072 21063973 ~ 21064908 (+)
G146703 NA non-coding upstream 763574 20867206 ~ 20867406 (+)
G146701 NA non-coding upstream 775062 20855711 ~ 20855918 (+)
G146915 NA non-coding downstream 75190 21710357 ~ 21712783 (+)
G146928 NA non-coding downstream 109712 21744879 ~ 21745451 (+)
G147022 NA non-coding downstream 312919 21948086 ~ 21948618 (+)
G147024 NA non-coding downstream 315161 21950328 ~ 21950587 (+)
G147027 NA non-coding downstream 321434 21956601 ~ 21957045 (+)
AMCG00005329 ipo13,LOC103463745,LOC105910849 other upstream 58659 21566638 ~ 21572321 (+)
G146790 NA other upstream 290268 21337432 ~ 21340712 (+)
AMCG00005280 NA other upstream 827783 20797458 ~ 20803197 (+)
AMCG00005286 NA other upstream 928508 20699486 ~ 20702472 (+)
G146596 NA other upstream 960811 20661926 ~ 20670169 (+)
AMCG00005340 ralgps2,LOC106531732 other downstream 45541 21680708 ~ 21704518 (+)
G146952 NA other downstream 176565 21811732 ~ 21848136 (+)
AMCG00005345 NA other downstream 248032 21883199 ~ 21887568 (+)
G147021 NA other downstream 310391 21945558 ~ 21947991 (+)
G147025 NA other downstream 317402 21952569 ~ 21952882 (+)

Expression


Co-expression Network