AMCG00005332


Basic Information

Item Value
gene id AMCG00005332
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21546435 ~ 21548854 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005332
ATGGACTCCATCAAGAGCTACAAGACAATGGTCAGTTCTGTGTCTCAGACCCATGTTCTGCTCATTGGGCCAGTGGGAGCCGGGAAATCCAGCTTCTTCAACTCCGTCAACTCGGTCTTCCGAGGTCACGTGACCAGCCAGGCCATGTCAGGAAGTTCCTCCAGAAGCCTGACCACACAGTTTCGGACCTATTCAGTCAGGGATGGGTGGAAAGGCAAAGCAGTGCCAATCGCCCTGTGTGACACCATGGGACTGGAGGAGGCCACAGAGGCGGGGCTTGATTTGGACGACCTTAGCAGCATTCTGAAGGGCCACATGCCGGACAGGTACCAGTTCAATCCCTCCTTCCCCCTGCGGTCACACAGCCCAGGATTTCGGGCCTCCATCTCACTGAAAGACAAGATCCACTGTGTTGCTTTTGTGATGGACGCCTGCAAAGTGAAGATCATGTCTCCTAAACTGGAGGAGAAAATGAGCACCATGCGCCAGAAGATCAACCAGCTTGGTGTCCCCCAGATGGTGCTGCTGACAAAGGTGGACGAGGCCTGTCCTGAGGTTGCGGAGAACACAAGTAATGTGTACCACAGCAGATACATTCAGAAGAAGATCCACGAGGCCGGGGCGTGCCTGGGAATTCCCGTCTCCTACATCCTTCCCATCCGCAACTACTCcacagagctggagctggacaCCAACACCGACATCCTGATACTGAGCGGGCTC

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005332 True 723 mRNA 0.55 5 21546435 21548854

Neighbor

gene id symbol gene type direction distance location
AMCG00005331 NA coding downstream 25404 21504165 ~ 21521031 (-)
AMCG00005312 NA coding downstream 83962 21457408 ~ 21462473 (-)
AMCG00005310 NA coding downstream 207207 21338245 ~ 21339228 (-)
AMCG00005306 NA coding downstream 212899 21331248 ~ 21333536 (-)
AMCG00005309 NA coding downstream 216445 21327357 ~ 21329990 (-)
AMCG00005334 NA coding upstream 3 21548857 ~ 21551959 (-)
AMCG00005330 LOC108238293 coding upstream 23774 21572628 ~ 21580706 (-)
AMCG00005324 LOC103461122 coding upstream 45172 21594026 ~ 21605919 (-)
AMCG00005318 NA coding upstream 70370 21619224 ~ 21631114 (-)
AMCG00005319 NA coding upstream 111654 21660508 ~ 21661923 (-)
G146813 NA non-coding downstream 164866 21381306 ~ 21381569 (-)
G146702 NA non-coding downstream 688633 20857600 ~ 20857802 (-)
G146652 NA non-coding downstream 789114 20756956 ~ 20757321 (-)
G146631 NA non-coding downstream 838829 20694815 ~ 20707606 (-)
G146623 NA non-coding downstream 910226 20634124 ~ 20636209 (-)
G146857 NA non-coding upstream 11195 21560049 ~ 21561461 (-)
G146891 NA non-coding upstream 41142 21589996 ~ 21606535 (-)
G146951 NA non-coding upstream 258126 21806980 ~ 21807306 (-)
G147122 NA non-coding upstream 583412 22132266 ~ 22180932 (-)
G147156 NA non-coding upstream 680345 22229199 ~ 22229991 (-)
AMCG00005333 NA other downstream 58724 21485949 ~ 21487711 (-)
G146618 NA other downstream 935792 20609354 ~ 20610643 (-)
AMCG00005276 pomgnt1 other downstream 1044229 20491051 ~ 20502206 (-)
AMCG00005270 pik3r3b,LOC107675943,LOC106584012 other downstream 1207270 20316060 ~ 20339165 (-)
G146532 NA other downstream 1266689 20274391 ~ 20279746 (-)
G146938 NA other upstream 196022 21744876 ~ 21745453 (-)
AMCG00005343 NA other upstream 196690 21745544 ~ 21747798 (-)
AMCG00005363 NA other upstream 422181 21971035 ~ 21982521 (-)
AMCG00005362 rgl1,LOC107657943,LOC107750730,LOC107717560 other upstream 481971 22030825 ~ 22054967 (-)
G147109 NA other upstream 487741 22036595 ~ 22101862 (-)

Expression


Co-expression Network