AMCG00005337


Basic Information

Item Value
gene id AMCG00005337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21733381 ~ 21737650 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005337
GCGTGCGTAACTACTACTAGTGCTAATAACAATCTGTTTGTAGTACAGAAGCCTATAGGGGTTTGTGTCGCTGTGCCAGTGTCAGGGTTACCCCCCCCGGGAGCCAGCCGGCAGGGCCGCCCGTCAGGAGCCGCAGCCGGAGACGTGTCACTTTAAGAGAAGGGGCGGTGTGGAGAGCCGGGCATGAGGAAGTGGATCCGGGAGCAGAGACGCGGAGACGGAGGAAAAGCGGCAGAAGCCTCTGCCATCGCCCGCAGTGGGACACACGGACACCCCGGGGAGGCGCAGGGGCTGGAGCGGAGAGCCTGCGAGGGGCGAGCGGAGCGAGGGAccgagaaacagagagagagagcggggggggcTCGCCACGTCAACCCCAGCTCCACAGCGCAGAGGGGCCGACTCCTCTCTCCTGCCGCACACAGACCGACAGACAGAAGGCCAACCGAGACAGTAACCACACTGCCTGAGGTGAGCAGAGACTCAGTGttcagtgctgggctgtgcgaTGACGGGGCTGCAGGGGtagagcgagggagggaggaggagaaaggaGGGAGTAGAGGCGGTAGCAGCAGTAGCAAAAGCTGTCCGGggaggatagagagagagagagagagggagatagaggtGAAGTGAGGCAAGGAAGGGGGAGAGGTAAGGTGAGGAGGGAGAGTGTGAAGGAGAACAGGCCTCctagggagaggagaggagaggaataCCATCCAGGAGGAGTGCAGAgcaaggaagaggtgagaggagagggagaggttgtGGGTGggtgagaggaggagaggaagagagcgG

Function

GO: NA

KEGG:

id description
ko05211 Renal cell carcinoma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005337 True 807 mRNA 0.62 3 21733381 21737650

Neighbor

gene id symbol gene type direction distance location
AMCG00005336 LOC106584283,LOC106613957 coding upstream 5511 21722580 ~ 21727870 (+)
AMCG00005339 ralgps2,LOC107581502,LOC107712857 coding upstream 24987 21707342 ~ 21708394 (+)
AMCG00005322 NA coding upstream 54278 21677587 ~ 21679103 (+)
AMCG00005317 NA coding upstream 66491 21662349 ~ 21666890 (+)
AMCG00005316 LOC107721804,LOC107712838,LOC105910841,LOC107597850,LOC101160230,LOC107581484 coding upstream 80593 21641391 ~ 21652788 (+)
AMCG00005338 NA coding downstream 34 21737684 ~ 21740828 (+)
AMCG00005335 LOC106569412 coding downstream 18537 21756187 ~ 21757882 (+)
AMCG00005344 NA coding downstream 135377 21873027 ~ 21878534 (+)
AMCG00005349 LOC107687326 coding downstream 179465 21917115 ~ 21919897 (+)
AMCG00005348 NA coding downstream 183234 21920884 ~ 21928473 (+)
G146915 NA non-coding upstream 20598 21710357 ~ 21712783 (+)
G146815 NA non-coding upstream 334410 21398676 ~ 21398971 (+)
G146782 NA non-coding upstream 404479 21326532 ~ 21328902 (+)
G146749 NA non-coding upstream 668473 21063973 ~ 21064908 (+)
G146703 NA non-coding upstream 865975 20867206 ~ 20867406 (+)
G146928 NA non-coding downstream 7229 21744879 ~ 21745451 (+)
G147022 NA non-coding downstream 210436 21948086 ~ 21948618 (+)
G147024 NA non-coding downstream 212678 21950328 ~ 21950587 (+)
G147027 NA non-coding downstream 218951 21956601 ~ 21957045 (+)
G147066 NA non-coding downstream 343994 22081644 ~ 22087344 (+)
AMCG00005340 ralgps2,LOC106531732 other upstream 28863 21680708 ~ 21704518 (+)
AMCG00005329 ipo13,LOC103463745,LOC105910849 other upstream 161060 21566638 ~ 21572321 (+)
G146790 NA other upstream 392669 21337432 ~ 21340712 (+)
AMCG00005280 NA other upstream 930184 20797458 ~ 20803197 (+)
AMCG00005286 NA other upstream 1030909 20699486 ~ 20702472 (+)
G146952 NA other downstream 74082 21811732 ~ 21848136 (+)
AMCG00005345 NA other downstream 145549 21883199 ~ 21887568 (+)
G147021 NA other downstream 207908 21945558 ~ 21947991 (+)
G147025 NA other downstream 214919 21952569 ~ 21952882 (+)
G147029 NA other downstream 219790 21957440 ~ 21984144 (+)

Expression


Co-expression Network