AMCG00005361


Basic Information

Item Value
gene id AMCG00005361
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 21982801 ~ 21995515 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005361
ATGccgagagagggaggaggcgaggagaggggaggggagcgGATGGGCGGCATGTTATTGAGGTTTAAAACCCTGCAGCTGACCTTCAGCATGGTGCGCCGCGTGGCCGTGATCGGAGCGGGCCCCTCGGGGCTGGTGTCCTTGAAGACCTGCCTGGACGAGGGACTGGAGCCGGAGGTGTCCGAGCAGGACCGGGCCAGTATTTACCGCTCTCTCACCGTCAACATCTCCAAGGAGATGATGTGCTATAGTGACTTCCCCATCCCTGCAGAATTCCCCAACTACATGCACCACTCGCGCATCCTGGAGTACCTGCGCATGTACGCCCAGCActtcaagctgctcccacacaTCCGCTTCCAGacctCTGTGCGCAGTGTGAGGGAGCGGCGGGATTTCTCTCGCACAGGACAGTGGGATGTTGTGACGGTGGACAAAAATGGACAGCAGGAGACCCACTTGTTTGATGCTGTGATGGTCTGTACGGGACACTACACCTATCCTAACCTGCCACTCAAGGAATTCCCAGGGATTGAAACATTCGAAGGGAAGTATTTCCACAGCTGGGAGTACAAGGAACCCGATGAGCTGAAAGGGAAGCGGATTGTGGTGATTGGCATTGGGAACTCCGGAGGGGACATCGCTGTGGAGTCCAGCAGAGTCGCTGAGCAGGTGTACATGAGCACTCGCCGGGGGGCCTGGGTCATCCGCGTCGTCTCCGATAAAGGCATTCCGGTGGACGTGCAGTACAACACGCGCTTCGTGCACATCCTCTTCCAGATCCTGCCCATCAGTGTCCTCAACTGGATCGGAGAGAGAATCCTGAACAAGCAGTACGACCACCACATGTACGCCCTGAAGCCCCAGCACAGGCTGTTCAGCCAGATCCCCGTGATCAACGATGACCTGCCCTTCCGCATCCTGTCGGGCTCGGTGGTGGTGAAGCCCAATGTGCGTGAGATCAGGGGCTCCAGCGTGGTGTTCGAGGACGGGACGGTTGTGGACAAGATCGATGTGGTGGTCTTCGCCACGGGATACAACTATGACTACCCCTTCCTGCCGCCCTCCATCCTCGGCAAGACTGGCCACAGGTTGGGCCTGTACAAGCACGTTTTCCCACCCAACCTGGAGCACCCCACGCTGGCGGTGGTGGGGTTCATCCACGGGCTGGGTGCCATCATGTGCATGGCGGAGATGCAGGCGCGCTGGGCCACCCGGGTCTTCACAGGACGGAAGAAGCTGCCGTCCAAGCAGGCGATGCTGAGGTCCATTGAGAATGACACCAAGCAGATGGAGAAGAGcTACATCTGCTCCAAGCTGGTCCCGCTGCAGGTGGACTTTGCCAGCTACCTGGACGACCTGGCGGGTGAGATCGGGGTGCGGCCGAACCTCTTCTGGCTGTTCTTCACAGACTACCCGCTGTGGAAGAAGGTCCTGATGGGCCCGCTCACCACCTACCAGTACCGGCTCCGGGGCCCGGGGCGCTGGCCCGACGCCCGGCATGCCATCTTCACGCAGATGGACCGCGTGACCCAGGCGCTGAAGACGCGGCCCATGCCCAAAAAGCCCGGGCCCTCGGTGGCACTGCGGTTGCTGAAGGCCTGCGTCGTGATCGCAATAGGCGCCGCCGTCGCCTACTACCTCCACTGGCACCCACCCGCCTTCCTGCAGGCTCGGCTCAGTGCCTTCATCGGCAAGGAACTCCTGAGGGAGCGTTCAGCTACACTGACAAACCGAGATTACAGCGAGGAATTCACCATGGTGCGCCGTGTGGCTGTGGTCGGAGCGGGCCTCTCGGGCCTGGCCTGTGTAAAGTGCTGCCTGGACGAGGGGCTGGAGCCGCTGTGCTTCGAGAGCAGCGAGGACATCGGGGGGCTCTGGAGGTTCAAGGAGAATCCCGAGCCGGGCAGAGCCAATATGTACCGCTCCCTCATCACTAACACCTCCAAGGAGATGATGTGCTTCAGCGACTTCCCGATCCCGGCGCACTTCCCCAACTACATGCACCACTCGCTCATCATGGACTACTTCCGCATGTACGCCGAGCACTTCCAGCTGCTCCCGCACATCCGCTTCCAGacctGTGTGCGCAGTGTGGAGCAGCGCCCTGACTTCTCTCGCTCGGGGCAGTGGGAGGTGGTCACAGTGGATAGGGAGGGACGGGAGGAGACACACATCTTTGATGCGGTGATGGTCTGCACGGGTCTCAACACGGAGCCAGTCCTGCCCCTCAATGAGTTCCCAGGGATCGAGTCTTTCGGAGGACGGTTCTTCCACAGTGTGGAGTACAAGGATCCGGAGGAGTTCAGAGGGAAAAGGATCCTGGTGATCGGGATCGGGAACTCTGGGGGGGACATCGCGGTGGAACTGAGCCGAGTCGCTGAGCAGaCTTTCCTGAGCACCCGTCACGGCGCCTGGATCGTCAGCCGTCTGTCCAGCAGAGGACTCCCTCTGGACCTGAAGGTCAACACGCGATACATGAGCCTGCTGACCCAATGGCTGCCCATGGCGCTGCTCAACTGGGCTGTTCAGCCGCACGCCGATGCTGAACGACGACCTGCCCGGACGCATCCTCTCGGGTGCCGTGGTGGTGAGGCCCGACGTGCGAGCTCTGGCGTGGAGTTCGAGGACGGGACGGGGGAGGACCAGATCGATGTGGTGGTCTTCGCCACAGGATACAACTACGGCTTTCCCTTCCTGCCGACCTCCGTCTCCCCCCAGCCCAGACAGCACCTGCGCCTGTACAAGAATGTCTTCCCCGCCGATCTGGAGCAGCCCACGCTGGCCATGGTGGGCTTGGTCAAGGCTGCCGGGCCCGTCATGCCCATAGTGGAAATGCAGGGGCGCTGGGCCACCCGAGTCATGAAAGGGCTGAACAAATTGCCAACCACGGCAGCCATGGTGATGGAGATTGAGTGTCAGAGGAAGAGGATGGAGAGAAGGTTCACTCCAGAGCACCATGCCCTCCAGGTGGACTACATGCCCTACATGGACGAGCTGGCGGAGCAGTTTGGGGTGCGCCCCAGTGTGCTGGCGCTGCTGCTGCGGGACCCTCGTCTGGGGCTGAGTGTGATGCTGGGCCCCTGCACCCCGTACCAGTACCGGCTCCGCGGGCCGGGGAAGTGGGCCGGCGCTCGCCACGCCATCCTCACACAGTGGGAGCGAGTGGCCCAGCCAATGAGGACGCGGCCGGTCCCGGACCTGCCACGCCCCTCCGGCCTGCCCCTGCTGCTCCATGTGTCGGTGGCCGGCCTGCTGCTCTGTGCCGCTGTGCTCTACACTCGCCAGCACCCCCCCGCCTTCCTGCAGGACCCCCCCGCCTGCCTACAGCAGCCCCTCACGTTTCTGCAGAGCCTGTGGCTGCGTTTCGCTCCACAGTGACCAGCGCTGACTGCCAGTGGAAGCACCTCTCACCCCTGACCACCATCACAACATCCACAATCCGGCTTCCTGCTCTGATTGCCTGCCCTGCCAAGGACCCTGACCCTAGGGCTGAACTGTCTGCCGCTCTCGGGATCGTCTGGGgtttataaatcacacatgagaatccagccaatcacagagcaccATTTCCAGCCATTCCTGTGCCTCGTATCTTGTGTATAATTGTCATCCCGTGTCACACAGTTTGTCAAGAAGCAAAGCAGAGcttataacaaataaaacaacacagcaacaatCAACAACAAGCGCCAACCCACCGGCCCCTGAGCATGGGGGTGAGGTCAGTGTCTCTGCTTGTTTCAGGCCTGTGCAAGTCCTGTGAAAATATCCAGTGTGTCCCTCTCTTACACTTACTGACACAGCAACACATGAGCTGTAACATCAAAGCTGTTCACTCCACTGTAGACCCACTGGCATCTCTGCGCCGTGTCCGTCCCAGCGCCCACCTCTCAGCCCAATGTCACTCTTAGCGCCTCCTCTCTTTGCCATGTCCGTTCCAGCGCCCCCTCTCAGTTCCGTGTCTGTCCCAGTGTCGCCTCTCAGCACCGTGTCCATCACCAAATGCCCCGTCTCTGTTCTGTACCCATCCCAGCACCCCTTCTCAGTCCGGATCTGTCCCAGCACCCCCCTCTGTGCTGTGTCAGTCTCAGAGACCACGTCAATGACTTTAGACTCATAAGGCATTAGGTTTAAATCCATTCAGCTTGAAgcagttaaaataatgtgttcacTGTGTTCTACTGGATCAGCACATACATGACAATAAACTCACTGCCAGCCCGCAGAGGCACTCTGAGTCTCTTCTGTGTGTCCAGAGTCTGGAAGCCCTGGTCAGCCACTCAGAC

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0004499 N,N-dimethylaniline monooxygenase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0050661 NADP binding molecular_function

KEGG:

id description
K00485 FMO; dimethylaniline monooxygenase (N-oxide forming)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005361 True 4289 mRNA 0.60 19 21982801 21995515

Neighbor

gene id symbol gene type direction distance location
AMCG00005352 NA coding downstream 22300 21959594 ~ 21960501 (-)
AMCG00005353 NA coding downstream 25860 21937448 ~ 21956941 (-)
AMCG00005354 NA coding downstream 66502 21911879 ~ 21916299 (-)
AMCG00005355 NA coding downstream 72515 21891314 ~ 21910286 (-)
AMCG00005346 suco coding downstream 121370 21845044 ~ 21861431 (-)
AMCG00005360 NA coding upstream 66218 22061733 ~ 22078827 (-)
AMCG00005359 NA coding upstream 90779 22086294 ~ 22087753 (-)
AMCG00005367 edem3 coding upstream 108627 22104142 ~ 22112254 (-)
AMCG00005369 NA coding upstream 150271 22145786 ~ 22146079 (-)
AMCG00005368 imp3,LOC107709332 coding upstream 151532 22147047 ~ 22158405 (-)
G146951 NA non-coding downstream 175495 21806980 ~ 21807306 (-)
G146891 NA non-coding downstream 376266 21589996 ~ 21606535 (-)
G146857 NA non-coding downstream 421340 21560049 ~ 21561461 (-)
G146813 NA non-coding downstream 601232 21381306 ~ 21381569 (-)
G146702 NA non-coding downstream 1124999 20857600 ~ 20857802 (-)
G147122 NA non-coding upstream 136751 22132266 ~ 22180932 (-)
G147156 NA non-coding upstream 233684 22229199 ~ 22229991 (-)
G147184 NA non-coding upstream 427474 22422989 ~ 22423230 (-)
G147185 NA non-coding upstream 430210 22425725 ~ 22426106 (-)
AMCG00005363 NA other downstream 280 21971035 ~ 21982521 (-)
AMCG00005343 NA other downstream 235003 21745544 ~ 21747798 (-)
G146938 NA other downstream 237348 21744876 ~ 21745453 (-)
AMCG00005333 NA other downstream 495090 21485949 ~ 21487711 (-)
G146618 NA other downstream 1372158 20609354 ~ 20610643 (-)
AMCG00005362 rgl1,LOC107657943,LOC107750730,LOC107717560 other upstream 35310 22030825 ~ 22054967 (-)
G147109 NA other upstream 41080 22036595 ~ 22101862 (-)
G147108 NA other upstream 88202 22083717 ~ 22084944 (-)
G147121 NA other upstream 132392 22127907 ~ 22130549 (-)
G147124 imp3,LOC107671714 other upstream 150186 22145701 ~ 22158415 (-)

Expression


Co-expression Network