AMCG00005373


Basic Information

Item Value
gene id AMCG00005373
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22416920 ~ 22422016 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005373
CACACTCCTGCTGTCTGAGAGGACGAAGTTCTGAGACACTCTccctcacacgcacacacacatgcgcacacacacacagacacacacacagacacacgcacgcacacacacacacacacacacacacacacttgcagaTCAACCTAAGAGCTAACTTCTGCTGGGACAccgagataaaaaaaaacaaattttccaATGGACGAATTAGACAGTTTACTGGAGGCGCTGGCTCAGAGCACTTCCCACAATGCAGAGGGGCAGGATGATGTCACCGAGAAGGACGGCGAAGTGACCGGGCAGGTCCAGCCCGTTTACACCACCAGATTCAAGGGCAGTCCAGCGACGGACGCAGACGCGGACCACGTGTACAGTGAGGTCCCAGAGCCAGTGGAGGTTGGGGTCCTGAGCCCAGGGTCGGCCGTACGGGAGCTGGACAGCATCATGAAGGGCCTGCAGGCTCTAGACCTGGACCTGGGGCTTCTTTCAAATTTTGAACTGGTTTCCTGTCGGCTGGTCCAGCGCTCATCCACGGGGTTAAAGCCTATTTATCTTTCAATTCCTGTCCAGATCCCTGGTGAGCCTGCCCTCTCAGCCCCACCGCCCCTCGTACCGAAGGGAAAGGACAGAGCGGTGGAGCAGAAGGAGAAAGAGGCTCAGAGACCGGCACAGGTGGAGACAAAGACCTCGGACCTGGCACCTGCCAAGCCAGCCAGCTCTGTCCCCGGTGGCAAAGGGGCCTCCATCGACGACCTCCTGGGGGACCTCAACACCAGTATGGAGAAGATGGGCGTGCACACCACGGCCAAGGGCCAGTGCGCGTCCTGTGGCAAGTGCATCGTGGGAAAGgtgaTCACGGCGCTGGGGGGGACCTGGCACCCGGAGcactttgtgtgctgtgtgtgcggCGTGGAGCTGAAGGCTTTCTTCGAGAGGGACGGGAAGCCCTTCTGTGAGGCGGACTACCAGAAACTGTTCTCCCCTCGCTGCGCGTACTGCAGCGGGCCCATCCTGCAGAACATCCTGACGGCGATGGACCGGGCATGGCACCCAGAGCACTTCTTCTGCACGGAGTGTGGGAAGGTGTTCGGCTCTGAGGGTGAGAGATGGACTCACTGCTGTCACGCGCTGGGGGACACGCTCACTGACAGAGACAGTGACTGCTCCCCCGACACAGGAAGTGATGTAATTGTATCAGGCATAGGGTTCCTGGAGAACGAGGGCAAGCCGTACTGCCATGAAGATTTCTACCGTCTGTTCGCGCCGAAATGCACCGGCTGTGGACAACCGGTGAAGGAGAACTACCTGTCAGCGGTGAACGGCACCTGGCACCCGGACTGCTTCGTGTGCACCgACTGCCTCACCCCGTTCCGTGACGGCTGCTTCATGGAGCTGGAAGGGCGGCCGCTGTGCTCCCTGCACTTCCACTCCCGGCAGGGCACGCTGTGTGGGGGCTGTCAGACACCCATCACGGGCCGCTGCGTGTCTGCCATGGGCCGTCGCTTCCACCCGGAGCACTTCGTCTGCGCCTTCTGCCTCCGCCAGCTGTCCCAGGGCGTGTtcaaagagagggaggagaagccCTATTGTGCCAGCTGCCACGACAAACTCTTCATTTAGAGGGAGGTGGAAATATCTCGCAAGAAACAGGGCCTTCAAGATTTTCTTCAACCGCcagtttgatttaattccaCAATGCAATCACAAGGATTTGCACTGTATAAAATCCAGCTTTAAGTCACGTAACTGAATGGATTGTTTTCTGCACTGGAGCCACTGTCGCCCTTGCCTGGTAGCTCACGTGCCGAGGCACAGAGCTGTGAACACCGGCTGGACTCATTTTTCACACCGGGTTTGCAAAGAAACAGCaagacttttttctttctccaccGTTCCCGACTCTGCTGATTTTAACCTGACAGCATCAGAGCCAGGGGGAAGCACCGACCCAGGTTTTCACTTCCAACCTTACGCTTCCAAACTTCCGAGCCTTACGGTTCGTCTGAGTGCCGGACGCAGCTGTACGCTTCCCTGCTGCCGTGGGAAATGAGCAGCACCATTGATCAGCAAAACAGGAATCTCTGGAGCCCCCTGTCTGTGGCAGGGCCAATCAGAGACCCCGTCTGTAGCACCGTCAATCAGAGCCACCTGTCTGTGGCAGGGCCAATCAGAGCTCCCTGTCTGTGGTAGGGCCaatcatgtttttaatccaTAGTTTACAACTTTTCAGCACCGACAGAGTCCAAATGCTCCTGCTGCTGACCCggctttccattttattttat

Function

GO: NA

KEGG:

id description
K05760 PXN; paxillin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005373 True 2282 mRNA 0.57 9 22416920 22422016

Neighbor

gene id symbol gene type direction distance location
AMCG00005375 trabd2a coding downstream 21498 22394314 ~ 22395422 (-)
AMCG00005374 LOC103372724 coding downstream 48858 22363594 ~ 22368062 (-)
AMCG00005382 fam78b,LOC106584378,LOC106613832,LOC105894228,LOC107717547,LOC103376640 coding downstream 193543 22215959 ~ 22223377 (-)
AMCG00005368 imp3,LOC107709332 coding downstream 258515 22147047 ~ 22158405 (-)
AMCG00005369 NA coding downstream 270841 22145786 ~ 22146079 (-)
G147156 NA non-coding downstream 186929 22229199 ~ 22229991 (-)
G147122 NA non-coding downstream 235988 22132266 ~ 22180932 (-)
G146951 NA non-coding downstream 609614 21806980 ~ 21807306 (-)
G146891 NA non-coding downstream 810385 21589996 ~ 21606535 (-)
G146857 NA non-coding downstream 855459 21560049 ~ 21561461 (-)
G147184 NA non-coding upstream 973 22422989 ~ 22423230 (-)
G147185 NA non-coding upstream 3709 22425725 ~ 22426106 (-)
G147143 NA other downstream 218152 22195366 ~ 22198768 (-)
G147124 imp3,LOC107671714 other downstream 258505 22145701 ~ 22158415 (-)
G147121 NA other downstream 286371 22127907 ~ 22130549 (-)
G147109 NA other downstream 315058 22036595 ~ 22101862 (-)

Expression


Co-expression Network