Gene
RNA
| Item | Value |
|---|---|
| gene id | G142953 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 1170013 ~ 1170516 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU179825 | True | 504 | lncRNA | 0.42 | 1 | 1170013 | 1170516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004771 | LOC107700326,LOC107562853,LOC107671548,LOC106613910,LOC108436878 | coding | downstream | 19723 | 1142360 ~ 1150290 (-) |
| AMCG00004772 | NA | coding | downstream | 61496 | 1074450 ~ 1108517 (-) |
| AMCG00004769 | LOC106613910 | coding | downstream | 98319 | 1014344 ~ 1071694 (-) |
| AMCG00004770 | NA | coding | downstream | 168685 | 1000536 ~ 1001328 (-) |
| AMCG00004767 | NA | coding | downstream | 224327 | 873876 ~ 945686 (-) |
| AMCG00004768 | cacna1e,LOC107665051,LOC107549680,LOC107599003 | coding | upstream | 6825 | 1177341 ~ 1177622 (-) |
| AMCG00004773 | NA | coding | upstream | 57609 | 1228125 ~ 1228583 (-) |
| AMCG00004779 | NA | coding | upstream | 349001 | 1519517 ~ 1520486 (-) |
| AMCG00004778 | agbl4 | coding | upstream | 391269 | 1561785 ~ 1606266 (-) |
| AMCG00004777 | bend5,LOC106584333 | coding | upstream | 520512 | 1691028 ~ 1718262 (-) |
| G142920 | NA | non-coding | downstream | 377064 | 789102 ~ 792949 (-) |
| G142902 | NA | non-coding | downstream | 387673 | 780418 ~ 782340 (-) |
| G142891 | NA | non-coding | downstream | 437054 | 732484 ~ 732959 (-) |
| G142890 | NA | non-coding | downstream | 464997 | 704290 ~ 705016 (-) |
| G142828 | NA | non-coding | downstream | 818386 | 307116 ~ 351627 (-) |
| G142959 | NA | non-coding | upstream | 119148 | 1289664 ~ 1289985 (-) |
| G142967 | NA | non-coding | upstream | 209364 | 1379880 ~ 1380879 (-) |
| G142972 | NA | non-coding | upstream | 215907 | 1386423 ~ 1386687 (-) |
| G142990 | NA | non-coding | upstream | 357062 | 1527578 ~ 1527810 (-) |
| G143046 | NA | non-coding | upstream | 724572 | 1895088 ~ 1924283 (-) |
| AMCG00004763 | LOC107393006 | other | downstream | 523402 | 644004 ~ 646611 (-) |
| G142773 | NA | other | downstream | 1039310 | 127778 ~ 130703 (-) |
| G142770 | NA | other | downstream | 1047486 | 119695 ~ 122527 (-) |
| G143145 | NA | other | upstream | 1539038 | 2709554 ~ 2710004 (-) |
| AMCG00004790 | ttc39a,LOC107743871,LOC107548186,LOC107699571 | other | upstream | 1949713 | 3120229 ~ 3217229 (-) |
| AMCG00004819 | zbtb37,LOC106613586 | other | upstream | 2938566 | 4109082 ~ 4116414 (-) |
| G143659 | NA | other | upstream | 4566293 | 5736809 ~ 5783184 (-) |
| G144050 | selenof,LOC106598901 | other | upstream | 7183473 | 8353989 ~ 8377001 (-) |
