G143029


Basic Information

Item Value
gene id G143029
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 2259729 ~ 2308874 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU179912
caatttccatttgtgtccccaggtccgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcttctgttccagggtcaaaaggttcagttccctcagtctctctgaatgggacattcccttcaaacctggaataagtctggttgctctcctctg

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 125

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179912 True 213 lncRNA 0.48 2 2259729 2308874

Neighbor

gene id symbol gene type direction distance location
AMCG00004775 NA coding upstream 802479 1435263 ~ 1457250 (+)
AMCG00004776 NA coding upstream 827919 1429518 ~ 1431810 (+)
AMCG00004774 NA coding upstream 852482 1406999 ~ 1407247 (+)
AMCG00004758 NA coding upstream 1599940 650702 ~ 659789 (+)
AMCG00004757 LOC107707585,LOC107599011,LOC107657879 coding upstream 1702448 539775 ~ 557281 (+)
AMCG00004782 elavl4,LOC106613894 coding downstream 181580 2490454 ~ 2490690 (+)
AMCG00004783 elavl4,LOC107657884,LOC106613894 coding downstream 239733 2548607 ~ 2558673 (+)
AMCG00004784 NA coding downstream 643437 2952311 ~ 2952624 (+)
AMCG00004786 NA coding downstream 689132 2998006 ~ 3002925 (+)
AMCG00004791 calr,LOC102308154,LOC102192544,LOC101484884,LOC107393148,LOC106512241,LOC100701980 coding downstream 943096 3251970 ~ 3262480 (+)
G142973 NA non-coding upstream 847522 1411957 ~ 1412207 (+)
G142958 NA non-coding upstream 969744 1289709 ~ 1289985 (+)
G142910 NA non-coding upstream 1466786 789038 ~ 792943 (+)
G142881 rpe65,LOC107708597,LOC107657893 non-coding upstream 1557971 667957 ~ 701758 (+)
G142847 NA non-coding upstream 1689586 566383 ~ 570143 (+)
G143074 NA non-coding downstream 250443 2559317 ~ 2562389 (+)
G143107 NA non-coding downstream 372430 2681304 ~ 2681548 (+)
G143109 LOC103376870 non-coding downstream 411424 2720298 ~ 2761630 (+)
G143166 NA non-coding downstream 775498 3084372 ~ 3086394 (+)
G143170 NA non-coding downstream 790248 3099122 ~ 3099384 (+)
AMCG00004749 NA other upstream 2136764 116491 ~ 122965 (+)
G143075 elavl4,LOC106613894,LOC103028496 other downstream 131667 2440541 ~ 2559080 (+)
AMCG00004788 NA other downstream 814207 3123081 ~ 3160209 (+)
AMCG00004793 NA other downstream 1068941 3377815 ~ 3395158 (+)
G143366 NA other downstream 1640552 3949426 ~ 3949837 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other downstream 1800148 4109022 ~ 4109655 (+)

Expression


Co-expression Network