G143144


Basic Information

Item Value
gene id G143144
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 2691356 ~ 2691959 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU180046
tttgcttctgcGTCTGATTTTCACGCACAATCCAGATATTTTGTTTCTACCCTGCTTCCAGTGTTTTTGGATTACAGATTTAAAGGCAAACCTGTTGAATGTCGTCCCGCTTTTAaggaaaatctgttttaatgtttgaagGATATGTCAATGGATAGCAAACAGCGAGACTAGTATTGTCTAGAACTGATCGGCATGGAAAGTATTGCTAAATTAGGATTTATAGTATAGGACGTGCGTTCGGCGTATTGTTTTTACTTTCGTTCGAATGATTACGAAGAAACACAGTAGAAAATATTCGCTGAAGATATTTTTTAGTCTGCGCTGCGTGacatgtacaaatataaaaaactttccattagtttttttgtttctggtttgGGCAGCCAAAATCGATAATAAGTCTAATGTTCTGTCTTTACAGTGTGGAGGTATGGAAATAGTTATAACTGTCTAATAAAACCTTCGTAGGCGAACCACAGcctatatgtttgtttgtttctctctctctctgtatatattttttattgcgctgaaaaaaataactgatacgtttgtgatgtttttgttttaaattcccaATTAAGCGACCCGTTAAAGTGAG

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180046 True 604 lncRNA 0.35 1 2691356 2691959

Neighbor

gene id symbol gene type direction distance location
AMCG00004785 dmrta2,LOC106613895,LOC106584330 coding downstream 84 2689246 ~ 2691272 (-)
AMCG00004781 NA coding downstream 486861 2201211 ~ 2204495 (-)
AMCG00004780 LOC100286605,LOC106613892,LOC103464064 coding downstream 779215 1896280 ~ 1912141 (-)
AMCG00004777 bend5,LOC106584333 coding downstream 973094 1691028 ~ 1718262 (-)
AMCG00004778 agbl4 coding downstream 1085090 1561785 ~ 1606266 (-)
AMCG00004787 faf1,LOC102783815 coding upstream 2066 2694025 ~ 2993047 (-)
AMCG00004789 rnf11,LOC106584326,LOC105019411,LOC106599774 coding upstream 345223 3037182 ~ 3047714 (-)
AMCG00004794 LOC106584322,LOC108266023,LOC102791747 coding upstream 713890 3405849 ~ 3416284 (-)
AMCG00004799 NA coding upstream 920952 3612911 ~ 3632903 (-)
AMCG00004800 NA coding upstream 949531 3641490 ~ 3648200 (-)
G143142 NA non-coding downstream 9795 2681320 ~ 2681561 (-)
G143105 NA non-coding downstream 50496 2640578 ~ 2640860 (-)
G143095 elavl4,LOC107657884,LOC106613894 non-coding downstream 129365 2556854 ~ 2561991 (-)
G143062 NA non-coding downstream 401216 2289579 ~ 2290140 (-)
G143046 NA non-coding downstream 767073 1895088 ~ 1924283 (-)
G143140 LOC103376870 non-coding upstream 39449 2731408 ~ 2736699 (-)
G143149 NA non-coding upstream 182408 2874367 ~ 2913555 (-)
G143158 NA non-coding upstream 312463 3004422 ~ 3004673 (-)
G143177 NA non-coding upstream 406543 3098502 ~ 3098715 (-)
G143180 NA non-coding upstream 413336 3105295 ~ 3107829 (-)
AMCG00004763 LOC107393006 other downstream 2044745 644004 ~ 646611 (-)
G142773 NA other downstream 2560653 127778 ~ 130703 (-)
G142770 NA other downstream 2568829 119695 ~ 122527 (-)
G143145 NA other upstream 17595 2709554 ~ 2710004 (-)
AMCG00004790 ttc39a,LOC107743871,LOC107548186,LOC107699571 other upstream 428270 3120229 ~ 3217229 (-)
AMCG00004819 zbtb37,LOC106613586 other upstream 1417123 4109082 ~ 4116414 (-)
G143659 NA other upstream 3044850 5736809 ~ 5783184 (-)
G144050 selenof,LOC106598901 other upstream 5662030 8353989 ~ 8377001 (-)

Expression


Co-expression Network