G143192


Basic Information

Item Value
gene id G143192
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 3234653 ~ 3236347 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU180105
ATACTGTGTTGCGAAATTTAGGGCAACTTagtgtacaattaaaatatactgctgctcaatattgaaaaacaaaacattgtttgaaTCGGGAAGGCTCTAAGACCCAGGAGCAGTCAGATATTGCATTCAACCAcacaacttttgtttttgtttttattagctttACAGCCAGGAAGAGAAAGAGTTGTATGAACACACAGGATTGAACAAGTTAAGCTAGTGTTTGCGCTTATCTGAACTCTACACAGCGATTGACAGTCTACGGACCCTGCTTTTGTGGCGTTGTCCGCTGGCTGTTTAAATGAGTTTTTTGTCGTGGAAACGGAGTATGAAGAGGAGTGAAATCCAAAGaggagactatgtggggacttgacccaggtcttcaaaatcgtgaagggcatcgaccacatcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180105 True 413 lncRNA 0.41 2 3234653 3236347

Neighbor

gene id symbol gene type direction distance location
AMCG00004786 NA coding upstream 231728 2998006 ~ 3002925 (+)
AMCG00004784 NA coding upstream 282029 2952311 ~ 2952624 (+)
AMCG00004783 elavl4,LOC107657884,LOC106613894 coding upstream 675980 2548607 ~ 2558673 (+)
AMCG00004782 elavl4,LOC106613894 coding upstream 743963 2490454 ~ 2490690 (+)
AMCG00004775 NA coding upstream 1777403 1435263 ~ 1457250 (+)
AMCG00004791 calr,LOC102308154,LOC102192544,LOC101484884,LOC107393148,LOC106512241,LOC100701980 coding downstream 15623 3251970 ~ 3262480 (+)
AMCG00004792 NA coding downstream 66156 3302503 ~ 3307925 (+)
AMCG00004795 xpr1,xpr1a,LOC106584313,LOC106613915,LOC105029208 coding downstream 296137 3532484 ~ 3556450 (+)
AMCG00004798 mfsd14a,LOC106613595 coding downstream 357053 3593400 ~ 3627243 (+)
AMCG00004796 NA coding downstream 396546 3632893 ~ 3642414 (+)
G143170 NA non-coding upstream 135269 3099122 ~ 3099384 (+)
G143166 NA non-coding upstream 148259 3084372 ~ 3086394 (+)
G143109 LOC103376870 non-coding upstream 473023 2720298 ~ 2761630 (+)
G143107 NA non-coding upstream 553105 2681304 ~ 2681548 (+)
G143074 NA non-coding upstream 672264 2559317 ~ 2562389 (+)
G143195 NA non-coding downstream 74560 3310907 ~ 3376024 (+)
G143218 NA non-coding downstream 140722 3377069 ~ 3377271 (+)
G143237 NA non-coding downstream 344735 3581082 ~ 3588105 (+)
G143302 NA non-coding downstream 452811 3689158 ~ 3690193 (+)
G143356 NA non-coding downstream 670246 3906593 ~ 3906921 (+)
AMCG00004788 NA other upstream 74444 3123081 ~ 3160209 (+)
G143075 elavl4,LOC106613894,LOC103028496 other upstream 675573 2440541 ~ 2559080 (+)
AMCG00004749 NA other upstream 3111688 116491 ~ 122965 (+)
AMCG00004793 NA other downstream 141468 3377815 ~ 3395158 (+)
G143366 NA other downstream 713079 3949426 ~ 3949837 (+)
G143404 LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 other downstream 872675 4109022 ~ 4109655 (+)
G143471 LOC107575789 other downstream 1135362 4371709 ~ 4372089 (+)
G143626 NA other downstream 2187356 5423703 ~ 5424121 (+)

Expression


Co-expression Network