Gene
RNA
| Item | Value |
|---|---|
| gene id | G143302 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 3689158 ~ 3690193 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048880 | sensory system development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU180232 | True | 1036 | lncRNA | 0.35 | 1 | 3689158 | 3690193 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004797 | NA | coding | upstream | 423 | 3678508 ~ 3688735 (+) |
| AMCG00004796 | NA | coding | upstream | 46744 | 3632893 ~ 3642414 (+) |
| AMCG00004798 | mfsd14a,LOC106613595 | coding | upstream | 61915 | 3593400 ~ 3627243 (+) |
| AMCG00004795 | xpr1,xpr1a,LOC106584313,LOC106613915,LOC105029208 | coding | upstream | 132708 | 3532484 ~ 3556450 (+) |
| AMCG00004792 | NA | coding | upstream | 381233 | 3302503 ~ 3307925 (+) |
| AMCG00004805 | cdc14a,LOC106613592 | coding | downstream | 12292 | 3702485 ~ 3720008 (+) |
| AMCG00004804 | cdc14a,cdc14ab,LOC107588060,LOC107653633,LOC107669826 | coding | downstream | 54839 | 3745032 ~ 3764307 (+) |
| AMCG00004803 | NA | coding | downstream | 87170 | 3777363 ~ 3778397 (+) |
| AMCG00004806 | NA | coding | downstream | 92605 | 3782798 ~ 3791933 (+) |
| AMCG00004807 | NA | coding | downstream | 138848 | 3829041 ~ 3841272 (+) |
| G143237 | NA | non-coding | upstream | 101053 | 3581082 ~ 3588105 (+) |
| G143218 | NA | non-coding | upstream | 311887 | 3377069 ~ 3377271 (+) |
| G143195 | NA | non-coding | upstream | 313134 | 3310907 ~ 3376024 (+) |
| G143192 | NA | non-coding | upstream | 452811 | 3234653 ~ 3236347 (+) |
| G143170 | NA | non-coding | upstream | 589774 | 3099122 ~ 3099384 (+) |
| G143356 | NA | non-coding | downstream | 216400 | 3906593 ~ 3906921 (+) |
| G143380 | NA | non-coding | downstream | 393906 | 4084099 ~ 4089273 (+) |
| G143403 | NA | non-coding | downstream | 412069 | 4102262 ~ 4103856 (+) |
| G143405 | NA | non-coding | downstream | 423068 | 4113261 ~ 4113488 (+) |
| G143414 | NA | non-coding | downstream | 443082 | 4133275 ~ 4133909 (+) |
| AMCG00004793 | NA | other | upstream | 294000 | 3377815 ~ 3395158 (+) |
| AMCG00004788 | NA | other | upstream | 528949 | 3123081 ~ 3160209 (+) |
| G143075 | elavl4,LOC106613894,LOC103028496 | other | upstream | 1130078 | 2440541 ~ 2559080 (+) |
| AMCG00004749 | NA | other | upstream | 3566193 | 116491 ~ 122965 (+) |
| G143366 | NA | other | downstream | 259233 | 3949426 ~ 3949837 (+) |
| G143404 | LOC107757485,LOC107715094,LOC107588062,LOC107653629,LOC106613586,LOC107592717,LOC107669813 | other | downstream | 418829 | 4109022 ~ 4109655 (+) |
| G143471 | LOC107575789 | other | downstream | 681516 | 4371709 ~ 4372089 (+) |
| G143626 | NA | other | downstream | 1733510 | 5423703 ~ 5424121 (+) |
| AMCG00004864 | NA | other | downstream | 3918708 | 7608901 ~ 7624070 (+) |
