G143370


Basic Information

Item Value
gene id G143370
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 3949415 ~ 3949837 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU180315
ATttcctcaggccaagagcgagacccatcctctccatgacgagctgcaggtattcgtggcccactctgtcgaaggctttctcctggtccaagctgattaggaccaggggaagccctctccaccacagacctggtcgggacccacgacttgagggagtggccgctgcagccggagcgtcagtgctttggccagtatcttgtagtcggtgcacaggaggctgaccggccACCAGTTCCTCAGATCTTTTTGGTCTCCCTTCTTGTGAAGAAGGGAGAGGATACTCTTCTTCATAGAAGGGGCCAatctaccctctctgtacatCGACCCCAAGACCTGGGCCAGATCTTCtttaagcacctcccaaaagatcttatagaacTCAGCAGGAATCCCATCGGGacccggtgtccttccagagttacG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU180315 True 423 lncRNA 0.56 1 3949415 3949837

Neighbor

gene id symbol gene type direction distance location
AMCG00004812 dph5,LOC106613590 coding downstream 14410 3932126 ~ 3935005 (-)
AMCG00004811 NA coding downstream 34454 3908147 ~ 3914961 (-)
AMCG00004808 NA coding downstream 85336 3856496 ~ 3864079 (-)
AMCG00004801 NA coding downstream 274591 3660865 ~ 3674824 (-)
AMCG00004802 NA coding downstream 295410 3648760 ~ 3654005 (-)
AMCG00004820 NA coding upstream 183872 4133709 ~ 4150001 (-)
AMCG00004823 NA coding upstream 251171 4201008 ~ 4217993 (-)
AMCG00004824 NA coding upstream 375126 4324963 ~ 4359936 (-)
AMCG00004829 patj,inadl coding upstream 489703 4439540 ~ 4482780 (-)
AMCG00004828 NA coding upstream 626579 4576416 ~ 4591430 (-)
G143355 slc30a7,LOC107653547,LOC107592711,LOC107588064 non-coding downstream 47256 3898216 ~ 3902159 (-)
G143318 NA non-coding downstream 177533 3771570 ~ 3771882 (-)
G143311 NA non-coding downstream 179072 3747928 ~ 3770343 (-)
G143258 NA non-coding downstream 358110 3589995 ~ 3591305 (-)
G143256 NA non-coding downstream 367232 3581150 ~ 3582183 (-)
G143372 NA non-coding upstream 22479 3972316 ~ 3972545 (-)
G143396 NA non-coding upstream 135609 4085446 ~ 4088993 (-)
G143400 serpinc1,LOC102797582 non-coding upstream 144813 4094650 ~ 4098416 (-)
G143406 NA non-coding upstream 157682 4107519 ~ 4108856 (-)
G143430 NA non-coding upstream 238121 4187958 ~ 4191281 (-)
AMCG00004790 ttc39a,LOC107743871,LOC107548186,LOC107699571 other downstream 732186 3120229 ~ 3217229 (-)
G143145 NA other downstream 1239411 2709554 ~ 2710004 (-)
AMCG00004763 LOC107393006 other downstream 3302804 644004 ~ 646611 (-)
G142773 NA other downstream 3818712 127778 ~ 130703 (-)
G142770 NA other downstream 3826888 119695 ~ 122527 (-)
AMCG00004819 zbtb37,LOC106613586 other upstream 159245 4109082 ~ 4116414 (-)
G143659 NA other upstream 1786972 5736809 ~ 5783184 (-)
G144050 selenof,LOC106598901 other upstream 4404152 8353989 ~ 8377001 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other upstream 4886523 8836360 ~ 8847775 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other upstream 4923048 8872885 ~ 8906594 (-)

Expression


Co-expression Network