Gene
RNA
| Item | Value |
|---|---|
| gene id | G143406 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 4107519 ~ 4108856 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008454 | alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU180353 | True | 1338 | lncRNA | 0.39 | 1 | 4107519 | 4108856 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004812 | dph5,LOC106613590 | coding | downstream | 172514 | 3932126 ~ 3935005 (-) |
| AMCG00004811 | NA | coding | downstream | 192558 | 3908147 ~ 3914961 (-) |
| AMCG00004808 | NA | coding | downstream | 243440 | 3856496 ~ 3864079 (-) |
| AMCG00004801 | NA | coding | downstream | 432695 | 3660865 ~ 3674824 (-) |
| AMCG00004802 | NA | coding | downstream | 453514 | 3648760 ~ 3654005 (-) |
| AMCG00004820 | NA | coding | upstream | 24853 | 4133709 ~ 4150001 (-) |
| AMCG00004823 | NA | coding | upstream | 92152 | 4201008 ~ 4217993 (-) |
| AMCG00004824 | NA | coding | upstream | 216107 | 4324963 ~ 4359936 (-) |
| AMCG00004829 | patj,inadl | coding | upstream | 330684 | 4439540 ~ 4482780 (-) |
| AMCG00004828 | NA | coding | upstream | 467560 | 4576416 ~ 4591430 (-) |
| G143400 | serpinc1,LOC102797582 | non-coding | downstream | 9103 | 4094650 ~ 4098416 (-) |
| G143396 | NA | non-coding | downstream | 18526 | 4085446 ~ 4088993 (-) |
| G143372 | NA | non-coding | downstream | 134974 | 3972316 ~ 3972545 (-) |
| G143370 | NA | non-coding | downstream | 157682 | 3949415 ~ 3949837 (-) |
| G143355 | slc30a7,LOC107653547,LOC107592711,LOC107588064 | non-coding | downstream | 205360 | 3898216 ~ 3902159 (-) |
| G143430 | NA | non-coding | upstream | 79102 | 4187958 ~ 4191281 (-) |
| G143528 | NA | non-coding | upstream | 682834 | 4791690 ~ 4858146 (-) |
| G143539 | NA | non-coding | upstream | 876532 | 4985388 ~ 4985694 (-) |
| G143544 | NA | non-coding | upstream | 907991 | 5016847 ~ 5017631 (-) |
| G143619 | NA | non-coding | upstream | 1218859 | 5327715 ~ 5402341 (-) |
| AMCG00004790 | ttc39a,LOC107743871,LOC107548186,LOC107699571 | other | downstream | 890290 | 3120229 ~ 3217229 (-) |
| G143145 | NA | other | downstream | 1397515 | 2709554 ~ 2710004 (-) |
| AMCG00004763 | LOC107393006 | other | downstream | 3460908 | 644004 ~ 646611 (-) |
| G142773 | NA | other | downstream | 3976816 | 127778 ~ 130703 (-) |
| G142770 | NA | other | downstream | 3984992 | 119695 ~ 122527 (-) |
| AMCG00004819 | zbtb37,LOC106613586 | other | upstream | 226 | 4109082 ~ 4116414 (-) |
| G143659 | NA | other | upstream | 1627953 | 5736809 ~ 5783184 (-) |
| G144050 | selenof,LOC106598901 | other | upstream | 4245133 | 8353989 ~ 8377001 (-) |
| AMCG00004894 | kat3,kyat3,ccbl2,LOC100332215 | other | upstream | 4727504 | 8836360 ~ 8847775 (-) |
| G144115 | LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 | other | upstream | 4764029 | 8872885 ~ 8906594 (-) |
