Gene
RNA
| Item | Value |
|---|---|
| gene id | G143857 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 7718260 ~ 7718802 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006396 | RNA processing | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU180906 | True | 277 | lncRNA | 0.42 | 2 | 7718260 | 7718802 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004872 | NA | coding | downstream | 18945 | 7689026 ~ 7699315 (-) |
| AMCG00004875 | asf1b,as1la | coding | downstream | 101762 | 7614353 ~ 7616498 (-) |
| AMCG00004865 | ttll7 | coding | downstream | 135749 | 7573191 ~ 7582511 (-) |
| AMCG00004866 | NA | coding | downstream | 155975 | 7536730 ~ 7562285 (-) |
| AMCG00004857 | NA | coding | downstream | 1109103 | 6590220 ~ 6609157 (-) |
| AMCG00004873 | NA | coding | upstream | 15095 | 7733897 ~ 7741545 (-) |
| AMCG00004874 | NA | coding | upstream | 43025 | 7761827 ~ 7763619 (-) |
| AMCG00004886 | NA | coding | upstream | 82048 | 7800850 ~ 7818689 (-) |
| AMCG00004885 | NA | coding | upstream | 103043 | 7821845 ~ 7830604 (-) |
| AMCG00004887 | LOC107564930 | coding | upstream | 119128 | 7837930 ~ 7852819 (-) |
| G143853 | NA | non-coding | downstream | 7685 | 7709879 ~ 7710575 (-) |
| G143834 | NA | non-coding | downstream | 51778 | 7606040 ~ 7666482 (-) |
| G143839 | NA | non-coding | downstream | 93555 | 7621166 ~ 7624705 (-) |
| G143782 | NA | non-coding | downstream | 922037 | 6795933 ~ 6796223 (-) |
| G143773 | NA | non-coding | downstream | 1082850 | 6635058 ~ 6635410 (-) |
| G143859 | NA | non-coding | upstream | 1372 | 7720174 ~ 7720886 (-) |
| G143860 | NA | non-coding | upstream | 3386 | 7722188 ~ 7726165 (-) |
| G143922 | NA | non-coding | upstream | 138548 | 7857350 ~ 7858712 (-) |
| G144072 | NA | non-coding | upstream | 808729 | 8527531 ~ 8528907 (-) |
| G144124 | NA | non-coding | upstream | 1197689 | 8916491 ~ 8921153 (-) |
| G143659 | NA | other | downstream | 1935076 | 5736809 ~ 5783184 (-) |
| AMCG00004819 | zbtb37,LOC106613586 | other | downstream | 3601846 | 4109082 ~ 4116414 (-) |
| AMCG00004790 | ttc39a,LOC107743871,LOC107548186,LOC107699571 | other | downstream | 4501031 | 3120229 ~ 3217229 (-) |
| G143145 | NA | other | downstream | 5008256 | 2709554 ~ 2710004 (-) |
| AMCG00004763 | LOC107393006 | other | downstream | 7071649 | 644004 ~ 646611 (-) |
| G144050 | selenof,LOC106598901 | other | upstream | 635187 | 8353989 ~ 8377001 (-) |
| AMCG00004894 | kat3,kyat3,ccbl2,LOC100332215 | other | upstream | 1117558 | 8836360 ~ 8847775 (-) |
| G144115 | LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 | other | upstream | 1154083 | 8872885 ~ 8906594 (-) |
| AMCG00005011 | best4,LOC103396708 | other | upstream | 4416576 | 12135378 ~ 12156378 (-) |
| AMCG00005022 | NA | other | upstream | 4625869 | 12344671 ~ 12348328 (-) |
