G144111


Basic Information

Item Value
gene id G144111
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 8852245 ~ 8852446 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU181233
agaAAAGTTAccaatatttaattaagaaatttgAATCAATATGCACTGGTAATGTCAACATgaatgaggaaaaacaaattgtagCAATGTTGAGTCTACCTACATTTCTAATTATCTCCTCTGAGATTATAAACAAGACTTTTAAATCTCAGTGGACTCTGGGTAAAATTGGCTAAAGCCATGAAGCACTTTCACGTTTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181233 True 202 lncRNA 0.32 1 8852245 8852446

Neighbor

gene id symbol gene type direction distance location
AMCG00004906 pkn2,LOC107718113 coding upstream 29311 8792926 ~ 8822934 (+)
AMCG00004892 lmo4,lmo4b,LOC107593176 coding upstream 323511 8514010 ~ 8528734 (+)
AMCG00004891 LOC106598897,LOC106560611,LOC104952770,LOC107694133 coding upstream 383475 8459350 ~ 8468770 (+)
AMCG00004897 LOC107700566,LOC107710622,LOC107578300,LOC105022607 coding upstream 506355 8333771 ~ 8345890 (+)
AMCG00004896 NA coding upstream 529202 8298457 ~ 8323043 (+)
AMCG00004903 lrrc8c,LOC106560305,LOC106584154,LOC107749978,LOC107593158 coding downstream 1813 8854259 ~ 8879736 (+)
AMCG00004905 LOC108413222,LOC107749977,LOC107675437,LOC107698886,LOC107564626,LOC107730703 coding downstream 37523 8889969 ~ 8906596 (+)
AMCG00004904 NA coding downstream 55385 8907831 ~ 8917401 (+)
AMCG00004910 NA coding downstream 297066 9149512 ~ 9198176 (+)
AMCG00004909 NA coding downstream 348679 9201125 ~ 9211479 (+)
G144082 NA non-coding upstream 26465 8793677 ~ 8825780 (+)
G143997 NA non-coding upstream 750906 8101026 ~ 8101339 (+)
G143962 NA non-coding upstream 802935 7978646 ~ 8049310 (+)
G143970 NA non-coding upstream 840227 8009531 ~ 8012018 (+)
G143923 NA non-coding upstream 977811 7873613 ~ 7874434 (+)
G144136 NA non-coding downstream 288196 9140642 ~ 9141904 (+)
G144137 NA non-coding downstream 293008 9145454 ~ 9145853 (+)
G144139 NA non-coding downstream 317549 9169995 ~ 9170249 (+)
G144141 NA non-coding downstream 320459 9172905 ~ 9173149 (+)
G144195 NA non-coding downstream 591210 9443656 ~ 9443894 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 1118186 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 1159884 7672816 ~ 7692361 (+)
AMCG00004864 NA other upstream 1228175 7608901 ~ 7624070 (+)
G143626 NA other upstream 3428124 5423703 ~ 5424121 (+)
G143471 LOC107575789 other upstream 4480156 4371709 ~ 4372089 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other downstream 847721 9700167 ~ 9750777 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other downstream 1095964 9948410 ~ 10015424 (+)
G144677 NA other downstream 2810235 11662681 ~ 11663368 (+)
G144940 NA other downstream 3928134 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 5302709 14155155 ~ 14188329 (+)

Expression


Co-expression Network