G144137


Basic Information

Item Value
gene id G144137
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 9145454 ~ 9145853 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU181265
CATTTTCTGTGACACATGTACTGATATAACAGTTGGTAAAGGTACCAACCCTAAAAGGTTCTCGCTAGAGGTATGGGAATAGGAGACCCTTACTTGTTCCTTCGAGGAGGGCAGCCCTTTTCCTCCGTGCGTACGCTCTGAGGTGATTGGACAGACTGACTGCGCTGGGAAATGTGGTATTGCAGTGGACACACACTTTCTTGTTGAGCTCATTCTTATCTGAAATGCAAGGGAAAATCATGACGGAATCAAATCTGatgtattattgtgtgttaAACAGATATAAAATCAAATAGCCTAGATAACAGAATCAGAGTTCCTTGTCCTCTAATTAATTTAtctggtgtattttttttattcattagaAATTGTGTTCCTTTTTGGATACTGATGATTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181265 True 400 lncRNA 0.40 1 9145454 9145853

Neighbor

gene id symbol gene type direction distance location
AMCG00004904 NA coding upstream 228053 8907831 ~ 8917401 (+)
AMCG00004905 LOC108413222,LOC107749977,LOC107675437,LOC107698886,LOC107564626,LOC107730703 coding upstream 238858 8889969 ~ 8906596 (+)
AMCG00004903 lrrc8c,LOC106560305,LOC106584154,LOC107749978,LOC107593158 coding upstream 265718 8854259 ~ 8879736 (+)
AMCG00004906 pkn2,LOC107718113 coding upstream 322520 8792926 ~ 8822934 (+)
AMCG00004892 lmo4,lmo4b,LOC107593176 coding upstream 616720 8514010 ~ 8528734 (+)
AMCG00004910 NA coding downstream 3659 9149512 ~ 9198176 (+)
AMCG00004909 NA coding downstream 55272 9201125 ~ 9211479 (+)
AMCG00004907 brd3a,brdt,LOC107686882,LOC107675431 coding downstream 179687 9325540 ~ 9343692 (+)
AMCG00004908 ephx4,LOC106584162 coding downstream 200995 9346848 ~ 9355689 (+)
AMCG00004914 NA coding downstream 214047 9359900 ~ 9397437 (+)
G144136 NA non-coding upstream 3550 9140642 ~ 9141904 (+)
G144111 NA non-coding upstream 293008 8852245 ~ 8852446 (+)
G144082 NA non-coding upstream 319674 8793677 ~ 8825780 (+)
G143997 NA non-coding upstream 1044115 8101026 ~ 8101339 (+)
G143962 NA non-coding upstream 1096144 7978646 ~ 8049310 (+)
G144139 NA non-coding downstream 24142 9169995 ~ 9170249 (+)
G144141 NA non-coding downstream 27052 9172905 ~ 9173149 (+)
G144195 NA non-coding downstream 297803 9443656 ~ 9443894 (+)
G144210 NA non-coding downstream 301736 9447589 ~ 9448533 (+)
G144218 NA non-coding downstream 318288 9464141 ~ 9466613 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 1411395 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 1453093 7672816 ~ 7692361 (+)
AMCG00004864 NA other upstream 1521384 7608901 ~ 7624070 (+)
G143626 NA other upstream 3721333 5423703 ~ 5424121 (+)
G143471 LOC107575789 other upstream 4773365 4371709 ~ 4372089 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other downstream 554314 9700167 ~ 9750777 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other downstream 802557 9948410 ~ 10015424 (+)
G144677 NA other downstream 2516828 11662681 ~ 11663368 (+)
G144940 NA other downstream 3634727 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 5009302 14155155 ~ 14188329 (+)

Expression


Co-expression Network