G144142


Basic Information

Item Value
gene id G144142
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 9140619 ~ 9141972 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU181271
tttataatgcattcaGAATTTACCTTCCCTTTTTTATATCAGCATCTTATTGTCctttaagaaaataaggaattcaaacattacatttctgaggcaaaaaaaaaacggcaaacaaaagaaacctgGGGAACTGGACAGTGATGGGTCTGAAATCATTTCTTACTCAACATCACTTGTAAGTATTGCTAGATGTTTTTGAAACTTTTCACTGAATTTTAGCAAGCTTTTAcagtgtttctatttttaaaagtcagacGTTAGGTTGGCAGCatttgtctctctttttttctctctccaaattttcattttaattgacagTGTGAACCCACTACCAAAAGAAACAACCCATACCTCAGATAGTGACAGGGTGGTGAGTCTGTAAGAATCAAATGCTGTTTGTAGGAACACTAGCAGACAAATTCTACATGTATAGTCAACAGCGCTACACTAGAAAGAATAGCATTACTAATGTTTTCATACCAGAAGAATACAATTTCACATTAACTTTATAGCTTATTGTAAATGCTTTCAGATATTTTCACAAgttctttaaaatcattaaacgcacaataatacaagattaattgtttattttgactgAAGACAACTTATATTGTTCAGCTGTTGAAACCACCGCAGCTGTATCAGTGTTTCTCAAGTGTGTGAATATGGTCAGTTTCGGTTTGGATCTCTGATCAGAGGTTTTCCTTCAGTTCGATAAACGCACGTCTTGAACAAAAAATCTCAGTGAACATTTGGATTTCAAATGTTAGAGGTAGCTGCATTCAGACAGCGGGACCTCACAACACAAAttcctgaaatatatatatatatataaatatatatacataaaattggtgtttattatgtaatttaaccaagttaaatacaaacatttcttttttttttttttggtgtgacTGAACCTCTTCTGTAATGTTGTTTAATACTGTAATTCTTATAATATTTGCTTCCTAATATCAAGAACCCTCACGTACAACTACCTTATGTAAACTGATTTACTGTTTCAGGAGATATGCAGGTAAATATGTGCAGAGAATTATCTACagataagctttttttttattttaaatgtaaaccacATGGTAATGGTGCTGAAACTTCCTCATGTTCTGTATGCTAAATAAAGATAAaaggttttagttttattcatcCTGAAAAACCTTGCGTGTTTCTGAGTAGTGAATGTAACAAGAACAAGTTATACATTtgtctgcttttaatttttgGATGTACTGAGATGGCGGTGTTCACCGTATAATCATTCAGCTTATTGCTGTAGATATAGCAACCTtttgctgaaataaaaaaggtaaaagcttttcttttgctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181271 True 1354 lncRNA 0.32 1 9140619 9141972

Neighbor

gene id symbol gene type direction distance location
AMCG00004901 barhl2,LOC102777546 coding downstream 64533 9072340 ~ 9076086 (-)
AMCG00004893 gtf2b,LOC107693714,LOC107585659 coding downstream 305219 8824870 ~ 8835400 (-)
AMCG00004900 NA coding downstream 766863 8367091 ~ 8373756 (-)
AMCG00004899 NA coding downstream 779771 8353966 ~ 8360848 (-)
AMCG00004898 NA coding downstream 851582 8276388 ~ 8289037 (-)
AMCG00004911 NA coding upstream 83679 9225651 ~ 9268221 (-)
AMCG00004912 NA coding upstream 139222 9281194 ~ 9287486 (-)
AMCG00004916 NA coding upstream 260819 9402791 ~ 9410450 (-)
AMCG00004917 NA coding upstream 290405 9432377 ~ 9457795 (-)
AMCG00004920 evi5 coding upstream 334865 9476837 ~ 9515322 (-)
G144124 NA non-coding downstream 219466 8916491 ~ 8921153 (-)
G144072 NA non-coding downstream 611712 8527531 ~ 8528907 (-)
G143922 NA non-coding downstream 1281907 7857350 ~ 7858712 (-)
G143860 NA non-coding downstream 1414454 7722188 ~ 7726165 (-)
G143859 NA non-coding downstream 1419733 7720174 ~ 7720886 (-)
G144205 NA non-coding upstream 275560 9417532 ~ 9418417 (-)
G144206 NA non-coding upstream 278530 9420502 ~ 9420880 (-)
G144208 NA non-coding upstream 297754 9439726 ~ 9440310 (-)
G144209 NA non-coding upstream 299328 9441300 ~ 9442501 (-)
G144241 rpl5,LOC103464060,LOC106584167,LOC101169281,LOC107732018,LOC107566486,LOC107692344,LOC107590646,LOC103368809 non-coding upstream 405231 9547203 ~ 9551306 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 234025 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 292844 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 763618 8353989 ~ 8377001 (-)
G143659 NA other downstream 3357435 5736809 ~ 5783184 (-)
AMCG00004819 zbtb37,LOC106613586 other downstream 5024205 4109082 ~ 4116414 (-)
AMCG00005011 best4,LOC103396708 other upstream 2993406 12135378 ~ 12156378 (-)
AMCG00005022 NA other upstream 3202699 12344671 ~ 12348328 (-)
G145046 NA other upstream 4194237 13336209 ~ 13336746 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 5822442 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 6361110 15503082 ~ 15535145 (-)

Expression


Co-expression Network