G144295


Basic Information

Item Value
gene id G144295
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 9744869 ~ 9750778 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU181471
ATTTGATACAATCTACCTTCCTTTACTTTTCCACATACATTTTGCTTCAGTGTTTGTAGGTAACACATCCATTTTACACCAATAAAAATTAGTTTAATGAACAtcttgaaggaaaacaaaaaggaaaatatacagaaacaagatcaaaaataaaaataaaccatcatGAACTTTCACCCTCTTGCAatttaattaagacattttagGAGAGCTTAATGACTTTTCCCCAATCAGTTATCAAATTAACCACAAATGTCACtgttatacagtaaatatataatcaCATACCTTCATGAGAGACGATATAGATTAGCAGTGCACATCTGGTTGTACTTGAGTGTAGAATAAAGATTTGAGGTTTTAAGATCTGGAAACGGGTATAAAATGCTTaggatttttaataaatgatgaTGCACAATACCCAAAGAAATACAGCTTGTTaacaagaaaaagataaaatgaagattgttttaaaaagttataaattcaTCTGTCCAATGAACTAAATTGgcaaaaacaatacttttgaGAGAAGTCTTGATTGTATAGCTAAAGTTATACAAgattaaatcacaatataaaAGCAACTGTAAAATGAACAGAGCAGAAATATTCATATACAGTATAAGAACCAGGCCTCCGAGGACACCCTTTCAAAGACAAACAGTAATGTGAAAACACAGAGGAAGAGGGCTGTGGCCATGGCACAGTGATGCAGCTACATGATTGCAGTTTTGACCATCCCAATTTTTTCCTTCCAACAATAAAATGTTGCTGCTTTTGAACCTGTTCCCAGACTCATTAGTCAAGTGGCACGGTTTGCAAAAACTGGTAAAAACAGTCCGATTGCTCCTCAGTAATACTGGTGGCAGAGAGTTGGCGATTTTGCACTCCTGCCACACCCTAAACTTGGACCTGGTCTTATACGAGTGTCTTCATGACCATTTGTAGACGACACAAAAAGGAGGGGGTTGTATTATGGGTGTTACTACTGGACAGCGCTACACCTGAACATCATCACAGACTGAACACAAACCTGTAAGGCCATTGATGGTAAGCTGGTCTCTTGGTTGGGCATGCCAGTTGTATTGTGGCACAAAAGCTGCATGGCTGTCACACAGATttagaaatatgaataaagTGTAAAGCTTGGATCCCCAAAAACCACAGTGGAACGTGCCATTTCATTTTGCCAGGGGAACACCAATTGGAATACAGAGTTTTGTCCCCATTTGGTTAGAAAAACACAGTTTTACCTATTGCTAGACAATCTTTTGAAAAACCATTTCAAGCTAAGAGCACCGTGTGGTAAATACAATcaggctttcttttttctctatTGCTGGTACAATCTGGAGATGTATAATTGCACACTCAAGATCAAATGTTCTACATTTTACACTCCAGTTAATATACATTAATCATTATAAAATGACAATAGAAAGATCCTTCATATTCTTATAAGGCATACTCATTTAAAGGGTTGCTGTAGTCCCAGGAACTGGAATGCAATGCCATTTTCCATCCTGTCTGCccgcaatacacacacactagtaGTTGGCTGTGTAACTTAGCTTGGCATTTATAAGTATCCGTTTAGATAGTGAAAGGCAGCATGTACAATACagattgtatgtttttaataccttgcatttaaacaatttgGTTTTACATATAACAGTACATATTTTACTATAAATTGTACACCCAGGTGTTGGGGGTCGGAATGAATTACTGAAAAACTGGGATCGAAATGGTCTATCCCGAGATGAAATCAATTGCATTTCAGCTTCTATGGCATACCCATCACTATCCACTACTAGTCAGGTTTTCAAACATATGgaaaatgtttatacatttttcccccaatttcacacagaaaaccaaACTGAACCAAGTTCAGTGTCACTCCAACTGATAACATACATGAAACATGGAGTTACTAGAATGATTAGTAGCATTTGACAGAATGGATAGATATATTCTGGAAGTggaaaacataagaaacattaCGGCAGGAGTTTCTTAACTATGCACTTTTACATACAAGCACATAACGAAGTTACATTTCAAACCAAAGTATTTtgatgattttttattattattattagaaacacTTGTTTGCATGATGCTAGCAACTGCAACATTACACAGGCGAATTAAAGatgattcaaatatttaaaacattgtagcAATGTTTTCTTCTAAAGATACATTATTCTTTATTGCTTGTTGTCCTATTAACAAGTTAAACTGGGCACAATGGCTAATCTCTTGCGATTGCACAGGCTTTTGGATCCCCTGCATCTCTTCTTCACCGGACACCCCAACAATTGTCTGCTTTATCAACAGCACAGCTCCACAGACCACGTCTGGCTGTTCTCAGTCTGCCACCCTGAGACAGGATTGGCTTTGTTGATGCATCATCACCGGTGCTGTATCAATGCACTGATGTCACTGAAGACACGTGTGCCTGTAACAAAGGGACTCTTGAGCAGCTTAATGTTATGCCGTAGCCTTTCACCCAGACCCGCCCCTCCGCCCCCTCAGCATCAGACAGGCGAAACCACCTCTTCCCACAGGATCAGGAACAGTGGCTGTCACTGTCTTCAGAAAGACGGTAGCTATTTTCAGAGACGTATATAGGGTTGTAGAAACTGAGTCatactgtttttaattggaaaaagaACATTAATTCTAAACTAATGAGAATTGTTGGCAAATACCTAAAACATGGATCTAATAATTTCCCCAACTAATATCCAGCAACTACAAAGCACTTTTCTTGCCCCCTTTCAATAGGATAAAGTAGTGAGATCTACACTGAGCACTATTCTCAGGCAACTTTGGTCTTAAACACATAATATATGAAGTAATGGGACACTGCACAGCTCTGATACAGCAGAGTGACAAACTGATACAGCGCTGAAATGACTAATCATCCTCAGGCTTGGTTtcctcgcacacacacacactattacagcattgtttttttaacaatcaaaaataaaataaaaaatgcttgcAGTTGAATTATGGTGTGGGGCACAAATTttcgtgtgtgcgtgtgcatgtgtgtggtggggggaaTCAGGAGGTTActaaaataagatttaaatattttttcttgtgtatataaatatatatatatatatatatatatatatacacacacacacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181471 True 3181 lncRNA 0.37 2 9744869 9750778

Neighbor

gene id symbol gene type direction distance location
AMCG00004919 NA coding downstream 186616 9553065 ~ 9558253 (-)
AMCG00004920 evi5 coding downstream 229547 9476837 ~ 9515322 (-)
AMCG00004917 NA coding downstream 287074 9432377 ~ 9457795 (-)
AMCG00004916 NA coding downstream 334419 9402791 ~ 9410450 (-)
AMCG00004912 NA coding downstream 457383 9281194 ~ 9287486 (-)
AMCG00004922 gadd45a,LOC106568974,LOC107678351,LOC107555372 coding upstream 6449 9757227 ~ 9760024 (-)
AMCG00004931 glul,LOC106569199,LOC106584177,LOC102795441,LOC106560331,LOC102192933 coding upstream 92140 9842918 ~ 9847710 (-)
AMCG00004933 med8 coding upstream 294438 10045216 ~ 10049989 (-)
AMCG00004937 NA coding upstream 364220 10114998 ~ 10123827 (-)
AMCG00004942 NA coding upstream 1144160 10894938 ~ 10896806 (-)
G144292 NA non-coding downstream 44460 9699314 ~ 9700409 (-)
G144286 NA non-coding downstream 60750 9683052 ~ 9684119 (-)
G144241 rpl5,LOC103464060,LOC106584167,LOC101169281,LOC107732018,LOC107566486,LOC107692344,LOC107590646,LOC103368809 non-coding downstream 193563 9547203 ~ 9551306 (-)
G144209 NA non-coding downstream 302368 9441300 ~ 9442501 (-)
G144208 NA non-coding downstream 304559 9439726 ~ 9440310 (-)
G144353 NA non-coding upstream 187202 9937980 ~ 9938611 (-)
G144502 NA non-coding upstream 1205307 10956085 ~ 10958001 (-)
G144587 NA non-coding upstream 1502837 11253615 ~ 11254574 (-)
G144612 fubp1 non-coding upstream 1568348 11319126 ~ 11322006 (-)
G144614 NA non-coding upstream 1571805 11322583 ~ 11328481 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 838275 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 897094 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 1367868 8353989 ~ 8377001 (-)
G143659 NA other downstream 3961685 5736809 ~ 5783184 (-)
AMCG00004819 zbtb37,LOC106613586 other downstream 5628455 4109082 ~ 4116414 (-)
AMCG00005011 best4,LOC103396708 other upstream 2384600 12135378 ~ 12156378 (-)
AMCG00005022 NA other upstream 2593893 12344671 ~ 12348328 (-)
G145046 NA other upstream 3585431 13336209 ~ 13336746 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 5213636 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 5752304 15503082 ~ 15535145 (-)

Expression


Co-expression Network