G144658


Basic Information

Item Value
gene id G144658
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 11505682 ~ 11505883 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU181933
aaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagacgagctactgtagctcaaattgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcatatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181933 True 202 lncRNA 0.54 1 11505682 11505883

Neighbor

gene id symbol gene type direction distance location
AMCG00004965 pigk coding upstream 23449 11472530 ~ 11482233 (+)
AMCG00004964 NA coding upstream 95340 11401533 ~ 11410342 (+)
AMCG00004969 LOC106596347 coding upstream 116069 11364432 ~ 11389613 (+)
AMCG00004968 fubp1 coding upstream 180019 11316701 ~ 11325663 (+)
AMCG00004970 NA coding upstream 191316 11309960 ~ 11314366 (+)
AMCG00004966 NA coding downstream 158963 11664846 ~ 11666101 (+)
AMCG00004976 NA coding downstream 176950 11682833 ~ 11716049 (+)
AMCG00004975 NA coding downstream 211439 11717322 ~ 11757176 (+)
AMCG00004974 slc44a5,LOC106613541,LOC106574020 coding downstream 254038 11759921 ~ 11782145 (+)
AMCG00004993 cryz coding downstream 333063 11838946 ~ 11840697 (+)
G144603 nexn non-coding upstream 174263 11329277 ~ 11331419 (+)
G144581 btf3l4,bt3l4,LOC107562065,LOC107655993,LOC104965512,LOC103026176 non-coding upstream 257874 11244602 ~ 11247808 (+)
G144549 NA non-coding upstream 305847 11198313 ~ 11199835 (+)
G144534 NA non-coding upstream 366339 11135757 ~ 11139343 (+)
G144512 NA non-coding upstream 508076 10996382 ~ 10997606 (+)
G144668 NA non-coding downstream 65053 11570936 ~ 11577247 (+)
G144680 NA non-coding downstream 163592 11669475 ~ 11671442 (+)
G144681 NA non-coding downstream 165672 11671555 ~ 11672485 (+)
G144682 NA non-coding downstream 166989 11672872 ~ 11673515 (+)
G144683 acadm,LOC107094222,LOC102791601,LOC107094221,LOC107584839,LOC107674066 non-coding downstream 168356 11674239 ~ 11676905 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 1490258 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 1754905 9700167 ~ 9750777 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 3771623 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 3813321 7672816 ~ 7692361 (+)
AMCG00004864 NA other upstream 3881612 7608901 ~ 7624070 (+)
G144677 NA other downstream 156798 11662681 ~ 11663368 (+)
G144940 NA other downstream 1274697 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 2649272 14155155 ~ 14188329 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 3873716 15379599 ~ 15384811 (+)
G145932 NA other downstream 6259374 17765257 ~ 17771525 (+)

Expression


Co-expression Network