G144682


Basic Information

Item Value
gene id G144682
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 11672872 ~ 11673515 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU181957
ACCACTAGCATTTTGTTGGAATAGAAAAGTAGGAATTATAGAACATGCTTTTTTCATGCACCCTACAATCATGGTTTATAAGAAAGTATGAAGCAGAAAACATACCTGCCCCGCGTGGGACTCTGATCCAGGCCTGCACCCAAATCCCCCATCAAAGTTCATACAGGACAGGACGAACTCCACTGCTTTGTCTATATTAACAGAGTTCAGCTTGCCCTGAAAGACCAATAACTTTCACTGAACATCCCGTTTAAAGCACAAGTTAAGCAGtgtaaaaaaagacagaagcaGCTGAACAACCTACTTTTATGTATACaagcttcaaattaaaaatatgaaggaGCTCATACCAGTAAAGCCAGGGTGGCTACTGCACAGAAGGAGAACCTTGTGTCAATTTCACCTGTAGGGAGAAATAAATGGCACTGTAAATGGCACCAAGACTCTCACTCTACTGCAGAGCTTCCAGATAGTAGATCTTCATGAAATTAggaaaataactatatacatagtCATAGGGAAAGGTAAGACTAAATTTATTTCACATGTCTGAGacttaatttacataattctgCACTTATGGTGAGGCAATACTGATACTGGAAACAAAAAGTTCAATTTGACTTCTCACTGGTAAATGTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181957 True 644 lncRNA 0.39 1 11672872 11673515

Neighbor

gene id symbol gene type direction distance location
AMCG00004966 NA coding upstream 6771 11664846 ~ 11666101 (+)
AMCG00004965 pigk coding upstream 190639 11472530 ~ 11482233 (+)
AMCG00004964 NA coding upstream 262530 11401533 ~ 11410342 (+)
AMCG00004969 LOC106596347 coding upstream 283259 11364432 ~ 11389613 (+)
AMCG00004968 fubp1 coding upstream 347209 11316701 ~ 11325663 (+)
AMCG00004976 NA coding downstream 9318 11682833 ~ 11716049 (+)
AMCG00004975 NA coding downstream 43807 11717322 ~ 11757176 (+)
AMCG00004974 slc44a5,LOC106613541,LOC106574020 coding downstream 86406 11759921 ~ 11782145 (+)
AMCG00004993 cryz coding downstream 165431 11838946 ~ 11840697 (+)
AMCG00004991 erich3 coding downstream 167651 11841166 ~ 11850241 (+)
G144681 NA non-coding upstream 387 11671555 ~ 11672485 (+)
G144680 NA non-coding upstream 1430 11669475 ~ 11671442 (+)
G144668 NA non-coding upstream 95625 11570936 ~ 11577247 (+)
G144658 NA non-coding upstream 166989 11505682 ~ 11505883 (+)
G144603 nexn non-coding upstream 341453 11329277 ~ 11331419 (+)
G144683 acadm,LOC107094222,LOC102791601,LOC107094221,LOC107584839,LOC107674066 non-coding downstream 724 11674239 ~ 11676905 (+)
G144788 LOC104960733 non-coding downstream 425849 12099364 ~ 12192733 (+)
G144804 NA non-coding downstream 520611 12194126 ~ 12194338 (+)
G144805 LOC107679324,LOC107728925 non-coding downstream 522757 12196272 ~ 12196773 (+)
G144809 zswim5,LOC106569256,LOC107728925,LOC107679324 non-coding downstream 565976 12239491 ~ 12242198 (+)
G144677 NA other upstream 9504 11662681 ~ 11663368 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 1657448 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 1922095 9700167 ~ 9750777 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 3938813 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 3980511 7672816 ~ 7692361 (+)
G144940 NA other downstream 1107065 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 2481640 14155155 ~ 14188329 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 3706084 15379599 ~ 15384811 (+)
G145932 NA other downstream 6091742 17765257 ~ 17771525 (+)
AMCG00005199 wdr78 other downstream 7141514 18815029 ~ 18821642 (+)

Expression


Co-expression Network