G144878


Basic Information

Item Value
gene id G144878
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 12302965 ~ 12303263 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182206
CGTAGATATCGTAATCGTAGGGAAAAACAGGATTCAGTAATCAAAACCAGAAATTTTGATATTGTGGCAACCCTACTCCTGATGAAGCCAGTGAGGCTGCTAGCCCCTCTACGGGGAGGACCGAGGGGATACTCACGGAGAAGCGTAGACAGATGTCGAGCGGCCCGTCCTCACTGGCCCCCTCGGTGCAGGGCCTGTAGTCGATGTAGCTGCAGAGACGCCCTGAGTAGTTGCAGAACTCCAGGAAGAGATGGGGGCCACTGCTGGCAGCTTCCACAGACTTGCAATTCTCCCTTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182206 True 299 lncRNA 0.54 1 12302965 12303263

Neighbor

gene id symbol gene type direction distance location
AMCG00005020 NA coding downstream 2456 12298967 ~ 12300509 (-)
AMCG00005017 NA coding downstream 5183 12289910 ~ 12297782 (-)
AMCG00005021 NA coding downstream 14447 12284394 ~ 12288518 (-)
AMCG00005004 zswim5,LOC107602525,LOC107728925,LOC107674240,LOC107714849 coding downstream 103895 12183940 ~ 12199070 (-)
AMCG00005009 hectd3,LOC107688506 coding downstream 130735 12163830 ~ 12172230 (-)
AMCG00005018 NA coding upstream 7088 12310351 ~ 12315652 (-)
AMCG00005019 NA coding upstream 36905 12340168 ~ 12344668 (-)
AMCG00005012 NA coding upstream 141089 12444352 ~ 12454372 (-)
AMCG00005029 NA coding upstream 477008 12780271 ~ 12801667 (-)
AMCG00005026 b4galt2 coding upstream 515347 12818610 ~ 12842175 (-)
G144877 toe1,LOC107579611 non-coding downstream 129 12302579 ~ 12302836 (-)
G144826 NA non-coding downstream 273516 12023514 ~ 12029449 (-)
G144821 NA non-coding downstream 292594 12009918 ~ 12010371 (-)
G144672 NA non-coding downstream 730555 11571190 ~ 11572410 (-)
G144659 NA non-coding downstream 796963 11505678 ~ 11506002 (-)
G144879 NA non-coding upstream 148 12303411 ~ 12303620 (-)
G144880 NA non-coding upstream 1360 12304623 ~ 12304887 (-)
G144893 NA non-coding upstream 64160 12367423 ~ 12368468 (-)
G144920 NA non-coding upstream 312452 12615715 ~ 12615950 (-)
G144941 NA non-coding upstream 477310 12780573 ~ 12781170 (-)
AMCG00005011 best4,LOC103396708 other downstream 146587 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 3396371 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 3455190 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 3925964 8353989 ~ 8377001 (-)
G143659 NA other downstream 6519781 5736809 ~ 5783184 (-)
AMCG00005022 NA other upstream 41408 12344671 ~ 12348328 (-)
G145046 NA other upstream 1032946 13336209 ~ 13336746 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 2661151 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 3199819 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 3655441 15958704 ~ 15978855 (-)

Expression


Co-expression Network