G144880


Basic Information

Item Value
gene id G144880
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 12304623 ~ 12304887 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182208
NNNtgtagcagaaggcagtttgttcgctgaagggctggagagcggtacacgaatgagcgtcagtgaaacatggtggaggttccttgcaagtttggggctgcatttctgcacatggagttggggatttggtcagaatgaatggtctcctcaatgctgagaagtacagcagatacttatccatcatgtgataccatcagggaggcatctgattggccccacatttattctgcagcatgacaacgaccccaaccatacagtgacagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182208 True 265 lncRNA 0.49 1 12304623 12304887

Neighbor

gene id symbol gene type direction distance location
AMCG00005020 NA coding downstream 4114 12298967 ~ 12300509 (-)
AMCG00005017 NA coding downstream 6841 12289910 ~ 12297782 (-)
AMCG00005021 NA coding downstream 16105 12284394 ~ 12288518 (-)
AMCG00005004 zswim5,LOC107602525,LOC107728925,LOC107674240,LOC107714849 coding downstream 105553 12183940 ~ 12199070 (-)
AMCG00005009 hectd3,LOC107688506 coding downstream 132393 12163830 ~ 12172230 (-)
AMCG00005018 NA coding upstream 5464 12310351 ~ 12315652 (-)
AMCG00005019 NA coding upstream 35281 12340168 ~ 12344668 (-)
AMCG00005012 NA coding upstream 139465 12444352 ~ 12454372 (-)
AMCG00005029 NA coding upstream 475384 12780271 ~ 12801667 (-)
AMCG00005026 b4galt2 coding upstream 513723 12818610 ~ 12842175 (-)
G144879 NA non-coding downstream 1003 12303411 ~ 12303620 (-)
G144878 NA non-coding downstream 1360 12302965 ~ 12303263 (-)
G144877 toe1,LOC107579611 non-coding downstream 1787 12302579 ~ 12302836 (-)
G144826 NA non-coding downstream 275174 12023514 ~ 12029449 (-)
G144821 NA non-coding downstream 294252 12009918 ~ 12010371 (-)
G144893 NA non-coding upstream 62536 12367423 ~ 12368468 (-)
G144920 NA non-coding upstream 310828 12615715 ~ 12615950 (-)
G144941 NA non-coding upstream 475686 12780573 ~ 12781170 (-)
G144954 NA non-coding upstream 508090 12812977 ~ 12815518 (-)
G145031 NA non-coding upstream 953035 13257922 ~ 13258861 (-)
AMCG00005011 best4,LOC103396708 other downstream 148245 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 3398029 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 3456848 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 3927622 8353989 ~ 8377001 (-)
G143659 NA other downstream 6521439 5736809 ~ 5783184 (-)
AMCG00005022 NA other upstream 39784 12344671 ~ 12348328 (-)
G145046 NA other upstream 1031322 13336209 ~ 13336746 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 2659527 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 3198195 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 3653817 15958704 ~ 15978855 (-)

Expression


Co-expression Network