G144908


Basic Information

Item Value
gene id G144908
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 12616638 ~ 12616932 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182246
ctCAACACCCATCAATATAGTCAATTCATTGTTTTCTAGATGTACCAGGAAAGATGGGCATTAGAAACCTTTTCTGAGCAAAGATGGCAAAGGCACACTGTGtatctatttatacatttgtatggGCTTTGGATTGGATAGATTTCTTATTGTCAAACAGCTGTAGAGCTTTCACTAGTTTGTAACTGATTTCCAGTAcagtacaaatacacaaaattagTTTCAAcacaatttctttcttttcctgtgaGCACATGCTAGATATTACTAATTATACATCAGAAATTGCTGCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182246 True 295 lncRNA 0.35 1 12616638 12616932

Neighbor

gene id symbol gene type direction distance location
AMCG00005023 LOC106599374 coding upstream 9021 12574253 ~ 12607617 (+)
AMCG00005013 LOC107657453 coding upstream 136213 12473551 ~ 12480425 (+)
AMCG00005015 dmap1,LOC107750524,LOC107699933,LOC107548533 coding upstream 248242 12348544 ~ 12368396 (+)
AMCG00005016 NA coding upstream 269808 12345526 ~ 12346830 (+)
AMCG00005014 NA coding upstream 309611 12301341 ~ 12307027 (+)
AMCG00005024 NA coding downstream 79380 12696312 ~ 12699461 (+)
AMCG00005028 slc6a9 coding downstream 152807 12769739 ~ 12780452 (+)
AMCG00005030 LOC102231678,LOC103359748,LOC108430294 coding downstream 186353 12803285 ~ 12810937 (+)
AMCG00005031 LOC105920302 coding downstream 333571 12950503 ~ 12954868 (+)
AMCG00005032 kiss1ra,LOC108411985,LOC106569085,LOC105898653 coding downstream 401605 13018537 ~ 13028796 (+)
G144811 NA non-coding upstream 358769 12256288 ~ 12257869 (+)
G144809 zswim5,LOC106569256,LOC107728925,LOC107679324 non-coding upstream 374440 12239491 ~ 12242198 (+)
G144805 LOC107679324,LOC107728925 non-coding upstream 419865 12196272 ~ 12196773 (+)
G144804 NA non-coding upstream 422300 12194126 ~ 12194338 (+)
G144788 LOC104960733 non-coding upstream 423905 12099364 ~ 12192733 (+)
G144942 NA non-coding downstream 165238 12782170 ~ 12783644 (+)
G144960 NA non-coding downstream 330250 12947182 ~ 12948973 (+)
G145007 NA non-coding downstream 588408 13205340 ~ 13208217 (+)
G145017 NA non-coding downstream 640785 13257717 ~ 13259076 (+)
G145039 NA non-coding downstream 698446 13315378 ~ 13317852 (+)
G144677 NA other upstream 953270 11662681 ~ 11663368 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 2601214 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 2865861 9700167 ~ 9750777 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 4882579 7718273 ~ 7734059 (+)
AMCG00004868 samd13 other upstream 4924277 7672816 ~ 7692361 (+)
G144940 NA other downstream 163648 12780580 ~ 12781170 (+)
AMCG00005060 LOC106599426 other downstream 1538223 14155155 ~ 14188329 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 2762667 15379599 ~ 15384811 (+)
G145932 NA other downstream 5148325 17765257 ~ 17771525 (+)
AMCG00005199 wdr78 other downstream 6198097 18815029 ~ 18821642 (+)

Expression


Co-expression Network