G145046


Basic Information

Item Value
gene id G145046
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 13336209 ~ 13336746 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182413
aaggctggcccgtgtggtccgatccaacagacgagctactgtagctcaaattgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccactgccgaaagcgcctacaatgagTGCGTAcagtgagcatcagaactggaccacggagcaatggaagaaggtggcctggtctgatgaatcacgagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatggagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccatgcctcgacgggtcagggctgttttggcagcaaaagggggacctacacaatattaggcaggtggtcataatgttatggctgat

Function

NR:

description
PREDICTED: phosphofurin acidic cluster sorting protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182413 True 538 TUCP 0.53 1 13336209 13336746
Loading

Neighbor

gene id symbol gene type direction distance location
AMCG00005036 mrps14,LOC107658361 coding downstream 18357 13315390 ~ 13317852 (-)
AMCG00005039 NA coding downstream 22632 13309544 ~ 13313577 (-)
AMCG00005037 NA coding downstream 29249 13301123 ~ 13306960 (-)
AMCG00005041 NA coding downstream 40790 13263243 ~ 13295419 (-)
AMCG00005040 NA coding downstream 73341 13260215 ~ 13262868 (-)
AMCG00005042 NA coding upstream 30185 13366931 ~ 13367263 (-)
AMCG00005048 NA coding upstream 54963 13391709 ~ 13429286 (-)
AMCG00005045 rfwd2 coding upstream 244715 13581461 ~ 13601804 (-)
AMCG00005044 LOC100380755 coding upstream 335997 13672743 ~ 13684709 (-)
AMCG00005049 astn1 coding upstream 368480 13705226 ~ 13710482 (-)
G145031 NA non-coding downstream 77348 13257922 ~ 13258861 (-)
G144954 NA non-coding downstream 520691 12812977 ~ 12815518 (-)
G144941 NA non-coding downstream 555039 12780573 ~ 12781170 (-)
G144920 NA non-coding downstream 720259 12615715 ~ 12615950 (-)
G144893 NA non-coding downstream 967741 12367423 ~ 12368468 (-)
G145129 NA non-coding upstream 724975 14061721 ~ 14062111 (-)
G145130 NA non-coding upstream 725598 14062344 ~ 14062624 (-)
G145131 NA non-coding upstream 726119 14062865 ~ 14063123 (-)
G145138 NA non-coding upstream 820834 14157580 ~ 14161976 (-)
G145146 NA non-coding upstream 843358 14180104 ~ 14183513 (-)
AMCG00005022 NA other downstream 987881 12344671 ~ 12348328 (-)
AMCG00005011 best4,LOC103396708 other downstream 1179831 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 4429615 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 4488434 8836360 ~ 8847775 (-)
G144050 selenof,LOC106598901 other downstream 4959208 8353989 ~ 8377001 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 1627668 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 2166336 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 2621958 15958704 ~ 15978855 (-)
AMCG00005158 NA other upstream 4206400 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 5405138 18741884 ~ 18764298 (-)

Expression

G145046 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
End of interactive chart.

G145046 Expression in each Bioproject

Bar chart with 7 bars.
G145046 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
End of interactive chart.

Co-expression Network