G145067


Basic Information

Item Value
gene id G145067
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 13573242 ~ 13573460 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182456
CTACAAGCACGGTGTCCCCGTccctatattttaaatacaactgCAAGGTATTTTGTGAATTTTTGGTTAGTTAGTTGCCTAAGCAAAATACAGGTCACAGGGCCATGCAGGCATCCTGAAAGTGTGATAATTGCCTAGAGAAATACTGGAAACACTCCACAAAATAAGCAGGTTATTTTCATTCAACTATTTTCATGGTAATGAGTGaagattacaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182456 True 219 lncRNA 0.37 1 13573242 13573460

Neighbor

gene id symbol gene type direction distance location
AMCG00005043 NA coding upstream 209690 13338099 ~ 13363552 (+)
AMCG00005035 NA coding upstream 274560 13295774 ~ 13298682 (+)
AMCG00005033 NA coding upstream 454218 13111217 ~ 13119024 (+)
AMCG00005032 kiss1ra,LOC108411985,LOC106569085,LOC105898653 coding upstream 544446 13018537 ~ 13028796 (+)
AMCG00005031 LOC105920302 coding upstream 618374 12950503 ~ 12954868 (+)
AMCG00005057 NA coding downstream 39146 13612606 ~ 13641696 (+)
AMCG00005058 NA coding downstream 71066 13644526 ~ 13647823 (+)
AMCG00005052 brinp2,LOC106569071,LOC105018207,LOC107720848 coding downstream 348767 13922227 ~ 13941911 (+)
AMCG00005050 brinp2,LOC106569071 coding downstream 383242 13956702 ~ 13964422 (+)
AMCG00005051 NA coding downstream 488919 14062379 ~ 14063936 (+)
G145039 NA non-coding upstream 255390 13315378 ~ 13317852 (+)
G145017 NA non-coding upstream 314166 13257717 ~ 13259076 (+)
G145007 NA non-coding upstream 365025 13205340 ~ 13208217 (+)
G144960 NA non-coding upstream 624269 12947182 ~ 12948973 (+)
G144942 NA non-coding upstream 789598 12782170 ~ 12783644 (+)
G145147 NA non-coding downstream 630674 14204134 ~ 14204512 (+)
G145251 NA non-coding downstream 1103249 14676709 ~ 14677597 (+)
G145268 NA non-coding downstream 1204778 14778238 ~ 14791127 (+)
G145278 NA non-coding downstream 1265124 14838584 ~ 14861156 (+)
G145281 NA non-coding downstream 1272628 14846088 ~ 14852741 (+)
G144940 NA other upstream 792072 12780580 ~ 12781170 (+)
G144677 NA other upstream 1909874 11662681 ~ 11663368 (+)
AMCG00004935 pbx1b,LOC108443834,LOC108272157,LOC106584178,LOC101069707,LOC105011758,LOC106599262 other upstream 3557818 9948410 ~ 10015424 (+)
AMCG00004921 gbg12,gng12,LOC105895117,LOC107555383,LOC107705318 other upstream 3822465 9700167 ~ 9750777 (+)
AMCG00004870 rpf1,LOC107745333 other upstream 5839183 7718273 ~ 7734059 (+)
AMCG00005060 LOC106599426 other downstream 581695 14155155 ~ 14188329 (+)
AMCG00005105 LOC102220226,LOC108442892 other downstream 1806139 15379599 ~ 15384811 (+)
G145932 NA other downstream 4191797 17765257 ~ 17771525 (+)
AMCG00005199 wdr78 other downstream 5241569 18815029 ~ 18821642 (+)
AMCG00005232 dock7 other downstream 5901679 19475139 ~ 19530453 (+)

Expression


Co-expression Network