G145146


Basic Information

Item Value
gene id G145146
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 14180104 ~ 14183513 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182562
ttgagaaagaaaaatgaaaccagAAGCTGGCATAGCCAAACTGAGTGCACAAAATTGCCTTTATATTTCCTTTTGCCCTTACACTTCCAAAATTCACATTCCTCCAAACTCTACGGTCCCTAAACCTCTGCTACACGGTGAAATCTAtgtgctttgtcttttttttttttctcctcgtTTTATCTCCACCACAACTCCCCTTGATATGATATGTACATCCCCTAGCTAGAGAATCTCTAAATTACACAATACttaaaaatctctttaaaattCTGCTCTCTATTATCTGCACAGGAGAAGCTtactatttataaaacacaaactcacaaTCTCATCGGTACAATATCTAACAACTTCCCCCAAAACCCCATCCCTTCCTCCTTGGCAGTATCTTACAATCCATCTCTGTACAAGCCCAATACAAGATATTGCTATATACAGTTATATTCAGGGCGACATTCCttgtaaatctatatatatataatttgtttctaTTCAGAACCGTATCTGACGTTCTGCGAGTTGAATTCGCGGCTCCGGAGGTCAGCTGCTCGACTTCAGTCAGTCTGTGATCCGGTGGACAGTCTCTGGCCTGGAGCCGTCACTAGCAGCTGCTGTTCTTGAACTCCCCGTTCTCCGTGATGGACAGCTTGGTGGGGTTGGTGGGCGAGATGCCGTTTCGGATGTTCTGCACGCTGTAGCGCTCCTTCACCTGCGTCAGGGCGCTCATGAGCCGGGAGTTGGCCGCATCCAGGGAGCTGATCCGCTTCTCCTGCGGTCTTCTGTTTGGCATCTATGACGGCCTGCATCTCCGCATGATCGCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182562 True 825 lncRNA 0.45 2 14180104 14183513

Neighbor

gene id symbol gene type direction distance location
AMCG00005054 NA coding downstream 90764 14082458 ~ 14089340 (-)
AMCG00005056 klhl20 coding downstream 104471 14066698 ~ 14075633 (-)
AMCG00005055 LOC104960769 coding downstream 118442 14050704 ~ 14061662 (-)
AMCG00005046 astn1 coding downstream 349758 13804007 ~ 13830346 (-)
AMCG00005047 astn1 coding downstream 435475 13739454 ~ 13744629 (-)
AMCG00005064 NA coding upstream 207723 14391236 ~ 14395883 (-)
AMCG00005070 nmnat2,LOC106569066,LOC107563562,LOC107678925,LOC107658365 coding upstream 296894 14480407 ~ 14483193 (-)
AMCG00005069 NA coding upstream 361309 14544822 ~ 14552948 (-)
AMCG00005071 NA coding upstream 399630 14583143 ~ 14618511 (-)
AMCG00005073 NA coding upstream 437667 14621180 ~ 14625015 (-)
G145138 NA non-coding downstream 18128 14157580 ~ 14161976 (-)
G145131 NA non-coding downstream 116981 14062865 ~ 14063123 (-)
G145130 NA non-coding downstream 117480 14062344 ~ 14062624 (-)
G145129 NA non-coding downstream 117993 14061721 ~ 14062111 (-)
G145031 NA non-coding downstream 921243 13257922 ~ 13258861 (-)
G145148 NA non-coding upstream 20746 14204259 ~ 14204489 (-)
G145173 NA non-coding upstream 243453 14426966 ~ 14455083 (-)
G145358 NA non-coding upstream 884900 15068413 ~ 15069113 (-)
G145387 NA non-coding upstream 921705 15105218 ~ 15105450 (-)
G145401 NA non-coding upstream 962285 15145798 ~ 15149592 (-)
G145046 NA other downstream 843358 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 1831776 12344671 ~ 12348328 (-)
AMCG00005011 best4,LOC103396708 other downstream 2023726 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 5273510 8872885 ~ 8906594 (-)
AMCG00004894 kat3,kyat3,ccbl2,LOC100332215 other downstream 5332329 8836360 ~ 8847775 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other upstream 780901 14964414 ~ 14969242 (-)
AMCG00005111 NA other upstream 1319569 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 1775191 15958704 ~ 15978855 (-)
AMCG00005158 NA other upstream 3359633 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 4558371 18741884 ~ 18764298 (-)

Expression


Co-expression Network