G145358


Basic Information

Item Value
gene id G145358
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 15068413 ~ 15069113 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182835
CTTTCGGCCGCTGGTGTCGGCTTCAGTGTGATCTGTCTCTGTTCGGCTGGTCTCTGCTGCTCTTGGGCCTTGCTGGGCGGCTCCTGGGGCTCGTCTCTCTGCTCGTTGTGCCTCTCCTGCTGCTCCCGCAGTTCTCGCAGCTCCCTCTCCTGCCGGCATATGCGGCCCTCGTACTGAGACTTCAGGGCGCTCATGCGCACCTCCTGCTCCTCCCTCTGCTGCTTCAGCTCCTCGATCTCCTTGGTCAGCTGCTCCTTGACACCGATGAGCTGGTTGATTTTCTGTTTGGCCCCCATGAAGGCTTTCTTGGTCTTCTCCTCTTTCTCCGTTATCTGCTGCCGGAGCTGCTCCTCCTGAGAGCAtttctcctgcagctcctgttTGAGGCGGGCCAGCTCGGGCTGCAACTTGTTTACCTGCTCCTGGACACTCTTCACCTCGGCCTCTCGCTCGCTCGCCAACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182835 True 464 lncRNA 0.60 3 15068413 15069113

Neighbor

gene id symbol gene type direction distance location
AMCG00005098 NA coding downstream 11436 15043032 ~ 15056977 (-)
AMCG00005099 LOC103137287 coding downstream 72207 14975251 ~ 14996206 (-)
AMCG00005082 ivns1abpa,ivns1abp,LOC107732388,LOC107553504 coding downstream 215598 14839394 ~ 14852815 (-)
AMCG00005083 NA coding downstream 256144 14805917 ~ 14812269 (-)
AMCG00005081 NA coding downstream 283571 14771562 ~ 14784842 (-)
AMCG00005100 NA coding upstream 5559 15074672 ~ 15080833 (-)
AMCG00005089 NA coding upstream 24842 15093955 ~ 15101859 (-)
AMCG00005087 NA coding upstream 48644 15117757 ~ 15119251 (-)
AMCG00005088 NA coding upstream 85315 15154428 ~ 15162185 (-)
AMCG00005093 NA coding upstream 96333 15165446 ~ 15182844 (-)
G145173 NA non-coding downstream 613330 14426966 ~ 14455083 (-)
G145148 NA non-coding downstream 863924 14204259 ~ 14204489 (-)
G145146 NA non-coding downstream 884900 14180104 ~ 14183513 (-)
G145138 NA non-coding downstream 906437 14157580 ~ 14161976 (-)
G145131 NA non-coding downstream 1005290 14062865 ~ 14063123 (-)
G145387 NA non-coding upstream 36105 15105218 ~ 15105450 (-)
G145401 NA non-coding upstream 76685 15145798 ~ 15149592 (-)
G145434 NA non-coding upstream 184400 15253513 ~ 15254888 (-)
G145436 NA non-coding upstream 186776 15255889 ~ 15257664 (-)
G145441 NA non-coding upstream 192234 15261347 ~ 15266948 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 99171 14964414 ~ 14969242 (-)
G145046 NA other downstream 1731667 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 2720085 12344671 ~ 12348328 (-)
AMCG00005011 best4,LOC103396708 other downstream 2912035 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 6161819 8872885 ~ 8906594 (-)
AMCG00005111 NA other upstream 433969 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 889591 15958704 ~ 15978855 (-)
AMCG00005158 NA other upstream 2474033 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 3672771 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 3943964 19013077 ~ 19024461 (-)

Expression


Co-expression Network