G145387


Basic Information

Item Value
gene id G145387
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 15105218 ~ 15105450 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182876
tctgccatttctgcctggatgcacttgcaccacctcaagctcaacctctccaaatcagatctcctctttttcccccactcttcctcaccttctgctgacctccccatctcgatccccttggaatccaccacactctctccttcttcttctgctaaaaatctaggagtcaccctggATCAtgcgctctccttctcccagcacatcaccacgctgacgcggACCTGCAGATTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182876 True 233 lncRNA 0.53 1 15105218 15105450

Neighbor

gene id symbol gene type direction distance location
AMCG00005089 NA coding downstream 3359 15093955 ~ 15101859 (-)
AMCG00005100 NA coding downstream 24385 15074672 ~ 15080833 (-)
AMCG00005098 NA coding downstream 48241 15043032 ~ 15056977 (-)
AMCG00005099 LOC103137287 coding downstream 109012 14975251 ~ 14996206 (-)
AMCG00005082 ivns1abpa,ivns1abp,LOC107732388,LOC107553504 coding downstream 252403 14839394 ~ 14852815 (-)
AMCG00005087 NA coding upstream 12307 15117757 ~ 15119251 (-)
AMCG00005088 NA coding upstream 48978 15154428 ~ 15162185 (-)
AMCG00005093 NA coding upstream 59996 15165446 ~ 15182844 (-)
AMCG00005092 olfml2b,LOC101471195,LOC102214710 coding upstream 137111 15242561 ~ 15249295 (-)
AMCG00005108 NA coding upstream 180253 15285703 ~ 15304821 (-)
G145358 NA non-coding downstream 36105 15068413 ~ 15069113 (-)
G145173 NA non-coding downstream 650135 14426966 ~ 14455083 (-)
G145148 NA non-coding downstream 900729 14204259 ~ 14204489 (-)
G145146 NA non-coding downstream 921705 14180104 ~ 14183513 (-)
G145138 NA non-coding downstream 943242 14157580 ~ 14161976 (-)
G145401 NA non-coding upstream 40348 15145798 ~ 15149592 (-)
G145434 NA non-coding upstream 148063 15253513 ~ 15254888 (-)
G145436 NA non-coding upstream 150439 15255889 ~ 15257664 (-)
G145441 NA non-coding upstream 155897 15261347 ~ 15266948 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding upstream 1269212 16374662 ~ 16375417 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 135976 14964414 ~ 14969242 (-)
G145046 NA other downstream 1768472 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 2756890 12344671 ~ 12348328 (-)
AMCG00005011 best4,LOC103396708 other downstream 2948840 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 6198624 8872885 ~ 8906594 (-)
AMCG00005111 NA other upstream 397632 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 853254 15958704 ~ 15978855 (-)
AMCG00005158 NA other upstream 2437696 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 3636434 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 3907627 19013077 ~ 19024461 (-)

Expression


Co-expression Network