G145436


Basic Information

Item Value
gene id G145436
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 15255889 ~ 15257664 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU182932
tttaattgaaggcACATCATCTTAATTCTTCATATAAAAAAcgataaaatattgttatagaTAAATATCCCTTTGATCGTGTCCAGCTGTCGTCTTGAAGAGTAATCCCAATTTAAAGACAATGGAAAGGATTGTAGCGATTGGGATGGAGCTCAACAAACTATGGAAGATCTTGAAATCGAAGTGCAAGACTGAAAGGAAGACACTTCCACTTGTACCTCCATATGGTACACATTGAAAATGGTTTTGACACATCCTTCATTTACATTTGGGAATGAAGTATTTTTCAACCTGCTTCATGAATGTAGATTTTAATCACACTTATTTGTATACACATCTCTACATATAGGTAGCTACATGATGTTAAATTGCCTACATTTTTTGATATAGCCCCATGTTATTTCCAGAAGTTGGCATTAATAACATTGCACTACTTTCACAACTcatccatttaaatgttttattccttgACTAAACTCAAAAGCTTGGTGTGTTTATCAGGCTACTCAAGATTCATCTGTTGGATACTTTGTctttacagaaatattaaaatgacaaatgtttcAGTAAACCTTTTAGGGGTTACCATCTTTGCAACTCAATTCCTGTTCATTGTTGCTGGCACTTAACCAGCATCCTTCAGTGACAGTCAggtcttgttttcagaaattaaagTCAGATGTACTGGGACTCTGAATAATAAAGGTTCAGGTTAGGGAAGGAAGATAACTGGTTCACTGTGATTCAGATAATATATTGAAACCAGCAGCATCCACAGAGTGAGTTTAAACAGCTGAGCACATCAAGTCAAATTCTATAGTCCAAATCTATGTAAGACACAATAAGATATGGCTCTTCTAATCAATTATCATCCAAATTCattattgattttcatgttCTTCCGaagtatgcatttaatttcacaagatatcatacataattaaaatactgtacttaaaaaaatattcttggAGATATATGAAGTTGATCTTAAAATCAGTATAATACAGCACGCACTGGCATTGATATTCATACATTTGCTCAGAATTGCATTACTATTAATTTGAACAGATACCCACACTTTTTCACAATGTAAGTTCTTCCACAGAAACATTTCAAGGCATCTTTAAAGTGCAAATAAATCGTTACCAAGTGATTTATTGAGAGTTAATGCAAAAATCAATCTTGGGAaggataaaaatgaaaactttgacccagaAGCCAAGAGAaaactacacacctgtacatcatagcaattacatttatgattagaatacaaaatgaagCCACCACTAtagtacaggcttgtagttttcCATTAGCAGGATGGccaatgttttgatttcattcCAGCCCTCGTCTTTCCAATGTAATCCACTACAGAACATGGGATTCTCTCTGCTCTATATCTTTTTTAGAAGCAAGTAAGTTTAAATGACATTGCTCAGAATGATAGTATATTAtatgaaagcaaaaataaaggCCTGCAAGGGAAAACGCCGGTAAAGACAAAGTTGTATATTCCTGAGCTATAGTAAAGTTCATGTCCGACACCCCCACATTAATGATTTACTGCTGCTGGTATATCTCATGATGAATCACAGCCTAGCTCTTCATGGCTCTTCACAGCAGTAACGGGTAGAATCAAGTGCGAGATCCGACTCCAAAGTCCACTCCACTTATCAGGATCCATTTGATTAAACGTGGCAGGCTGGGCTGAAGTGAGGAATTTATCCTCAATGTGATCTCGGACCTTCTCTTCCACCTCACCCAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182932 True 1776 lncRNA 0.36 1 15255889 15257664

Neighbor

gene id symbol gene type direction distance location
AMCG00005092 olfml2b,LOC101471195,LOC102214710 coding downstream 6594 15242561 ~ 15249295 (-)
AMCG00005093 NA coding downstream 73045 15165446 ~ 15182844 (-)
AMCG00005088 NA coding downstream 93704 15154428 ~ 15162185 (-)
AMCG00005087 NA coding downstream 136638 15117757 ~ 15119251 (-)
AMCG00005089 NA coding downstream 154030 15093955 ~ 15101859 (-)
AMCG00005108 NA coding upstream 28039 15285703 ~ 15304821 (-)
AMCG00005109 NA coding upstream 53929 15311593 ~ 15333520 (-)
AMCG00005106 NA coding upstream 90971 15348635 ~ 15351466 (-)
AMCG00005107 NA coding upstream 102309 15359973 ~ 15369988 (-)
AMCG00005101 NA coding upstream 160911 15418575 ~ 15436970 (-)
G145434 NA non-coding downstream 1001 15253513 ~ 15254888 (-)
G145401 NA non-coding downstream 106297 15145798 ~ 15149592 (-)
G145387 NA non-coding downstream 150439 15105218 ~ 15105450 (-)
G145358 NA non-coding downstream 186776 15068413 ~ 15069113 (-)
G145173 NA non-coding downstream 800806 14426966 ~ 14455083 (-)
G145441 NA non-coding upstream 3683 15261347 ~ 15266948 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding upstream 1116998 16374662 ~ 16375417 (-)
G145760 NA non-coding upstream 1706539 16964203 ~ 16965074 (-)
G145995 NA non-coding upstream 2767101 18024765 ~ 18025674 (-)
G146022 NA non-coding upstream 3040183 18297847 ~ 18298103 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 286647 14964414 ~ 14969242 (-)
G145046 NA other downstream 1919143 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 2907561 12344671 ~ 12348328 (-)
AMCG00005011 best4,LOC103396708 other downstream 3099511 12135378 ~ 12156378 (-)
G144115 LOC108413222,LOC107749977,LOC107730703,LOC107698886,LOC107675437,LOC107564626 other downstream 6349295 8872885 ~ 8906594 (-)
AMCG00005111 NA other upstream 245418 15503082 ~ 15535145 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other upstream 701040 15958704 ~ 15978855 (-)
AMCG00005158 NA other upstream 2285482 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 3484220 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 3755413 19013077 ~ 19024461 (-)

Expression


Co-expression Network