G145760


Basic Information

Item Value
gene id G145760
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 16964203 ~ 16965074 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU183346
CTCTTGAGGTTTTCATCCATCTCATAATGTTTGGTAAGTTTGTATTCTACCAGGTTAGCAAGCTCCTTTGCATTATCTAAAGGTTCCGTTTATATCTGATTCCAGGGTTTTCATCCAAAGTTGCGCACAATGTTACAATTTGATCTGCTATTGCCTccaatgtttgctttttgtcAGTGCTGTGGCTGCTGTAAATACTCTTGAAAGCTGCAGGATTGTCAAGAGTGAACACCTACAAACAGTTAGAAAGTGTTGAATAGTCTGTCGCAGATACACTGACAACTGATGTCATATATACGGATATTCCTGAGTGTTTTAATGACTGTATAACGAGATCTAGttaatgcacacaaaataaaagactTACATTTCAGAATAACAGCCATttcatttaacataaaaaagaaagtatAAAACCATTGGTGAAAATTACACTATACTTACTTGGGATTCCTGAGgcaaaaaagaaatgtttatttccttACAAACTCGTATTGACTTTCCACAACCGGTCTTCAGGCTGTTAAACAACGCATCAGGGCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183346 True 545 lncRNA 0.36 2 16964203 16965074

Neighbor

gene id symbol gene type direction distance location
AMCG00005150 NA coding downstream 3334 16954875 ~ 16960869 (-)
AMCG00005151 NA coding downstream 20027 16920469 ~ 16944176 (-)
AMCG00005152 NA coding downstream 43739 16915257 ~ 16920464 (-)
AMCG00005148 NA coding downstream 56373 16903900 ~ 16907830 (-)
AMCG00005139 slc25a24,LOC108439838 coding downstream 88948 16862978 ~ 16875255 (-)
AMCG00005149 NA coding upstream 10509 16975583 ~ 16980358 (-)
AMCG00005165 NA coding upstream 40236 17005310 ~ 17033426 (-)
AMCG00005164 wdr47,LOC102290984 coding upstream 82971 17048045 ~ 17062557 (-)
AMCG00005163 NA coding upstream 99525 17064599 ~ 17087674 (-)
AMCG00005162 camsap2,LOC105906931,LOC107679834 coding upstream 136453 17101527 ~ 17109305 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 588786 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 1697255 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 1706539 15255889 ~ 15257664 (-)
G145434 NA non-coding downstream 1709315 15253513 ~ 15254888 (-)
G145401 NA non-coding downstream 1814611 15145798 ~ 15149592 (-)
G145995 NA non-coding upstream 1059691 18024765 ~ 18025674 (-)
G146022 NA non-coding upstream 1332773 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 1386793 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 2118921 19083995 ~ 19086041 (-)
G146227 NA non-coding upstream 2253317 19218391 ~ 19219758 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 985348 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 1429058 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 1994961 14964414 ~ 14969242 (-)
G145046 NA other downstream 3627457 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 4615875 12344671 ~ 12348328 (-)
AMCG00005158 NA other upstream 578072 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 1776810 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 2048003 19013077 ~ 19024461 (-)
G146313 NA other upstream 2604985 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 2793158 19758232 ~ 19761446 (-)

Expression


Co-expression Network