G146256


Basic Information

Item Value
gene id G146256
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 19463996 ~ 19464975 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU183989
tACCACTGTATGCATATTCTTTATtgtgctctttaaaaaaaaaaaacaccaaacatcTGGTGACAGATATTGAGGACGTctttataaaacacattgaCATCTGAACTTGTGTAAATGGCTTCTGAATCACAGAGCAATGCAGGGGGAACAGACAGAGGCAAGCAGTGCTTTAGAATTACTTACAAATGTTCCCTAATGCACCAGGATTGCATTAGTAGGACATTTTGCATCTGCACGGTCTCGTCGAGCTGCAGTGACTCCAGTTTTCTGCATCCGAGCGCAAAGGAGACACCAGAGCAGTTTGACTCAGGTTCAACAGATCAGACACAGGAGACAACCCGTAGCCGTGTGAACTAGTCTGAGAGTGAATTGAGACGGGATACATGCATCTTGAGCTGGGCACCGGATTCCTCCGATGTATCAAACCATTTCAAGTGAGTATCAGGGATCTAAAGATAAAATAACGTAAACAGTTCATGTCCACAATTAAACCTCCTCTGACTCGTTGCTAAAATGGTTTGGCTCCCATTAGAAAATTGTGCCGTTACAATTGCATGATCTACAAAACCCAGAGAATTGTGGCGATGCTCAGACTGAGCAACACAACACCATTTTCAGAGGGAAGAGACTCACAGTTAACCTCCTGCacagagagaataaaataacaccCTTTACAAGCTGGTTCTTAATTGACACACCACAGTGTTAAAGTGAGTGTCAGTCTCTGCTAACAGCTGTATGTGCTGCACACTCTTCAACCCCCAGTAAGGCACGGACAACCCCTCGGCACGCCTGTCACGGGCGCCTCGAGCCACATAGGTTTACTCAGTAAGGCATAAGATTTGGTTTCCCGCGCTGATCTTTAATTCAGATTTCCCGCTGCACTGAACAGATCTCGTCCTTCAGTCGCACGGAGGATCACAGAGCACCTTTCCCCCAGGGACGCCCCGAGCATCCGAGTCCTCCTCCAGACCCCCNNN

Function

NR:

description
PREDICTED: protein UXT

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183989 True 980 lncRNA 0.46 1 19463996 19464975

Neighbor

gene id symbol gene type direction distance location
AMCG00005217 NA coding upstream 348302 19092227 ~ 19115694 (+)
AMCG00005197 NA coding upstream 637504 18824891 ~ 18826492 (+)
AMCG00005198 NA coding upstream 657506 18793732 ~ 18806490 (+)
AMCG00005203 serbp1a,LOC107724138,LOC107551037,LOC102797140,LOC107684131 coding upstream 710406 18741992 ~ 18753590 (+)
AMCG00005204 NA coding upstream 730068 18728705 ~ 18733928 (+)
AMCG00005231 NA coding downstream 87488 19552463 ~ 19564086 (+)
AMCG00005239 NA coding downstream 236488 19701463 ~ 19704317 (+)
AMCG00005237 NA coding downstream 244361 19709336 ~ 19711528 (+)
AMCG00005238 NA coding downstream 277378 19742353 ~ 19755790 (+)
AMCG00005235 LOC106598390,LOC106594647 coding downstream 297193 19762168 ~ 19771973 (+)
G146222 NA non-coding upstream 244651 19218431 ~ 19219345 (+)
G146202 NA non-coding upstream 268792 19117531 ~ 19195204 (+)
G146188 NA non-coding upstream 379679 19084019 ~ 19084317 (+)
G146172 NA non-coding upstream 410870 19048548 ~ 19053126 (+)
G146140 NA non-coding upstream 567269 18893067 ~ 18896727 (+)
G146303 NA non-coding downstream 104498 19569473 ~ 19570003 (+)
G146304 NA non-coding downstream 108348 19573323 ~ 19575574 (+)
G146306 NA non-coding downstream 120473 19585448 ~ 19585656 (+)
G146307 NA non-coding downstream 127775 19592750 ~ 19593094 (+)
G146350 NA non-coding downstream 295177 19760152 ~ 19760791 (+)
AMCG00005199 wdr78 other upstream 642354 18815029 ~ 18821642 (+)
G145932 NA other upstream 1692471 17765257 ~ 17771525 (+)
AMCG00005105 LOC102220226,LOC108442892 other upstream 4079185 15379599 ~ 15384811 (+)
AMCG00005060 LOC106599426 other upstream 5275667 14155155 ~ 14188329 (+)
G144940 NA other upstream 6682826 12780580 ~ 12781170 (+)
AMCG00005232 dock7 other downstream 10164 19475139 ~ 19530453 (+)
G146305 NA other downstream 114598 19579573 ~ 19579807 (+)
G146519 NA other downstream 717379 20182354 ~ 20184643 (+)
AMCG00005272 mast2 other downstream 788034 20253009 ~ 20279786 (+)
G146575 LOC103468264,LOC108238356,LOC106512499 other downstream 1056674 20521649 ~ 20524819 (+)

Expression


Co-expression Network